RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 IGHV4-61A0A0C4DH41 118 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 TMEM229AB2RXF0 380 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 NPIPB7O75200 414 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 ERCC1P07992 297 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-203ENST00000593641 ZCCHC18P0CG32 403 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 KITP10721 976 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 HOXB1P14653 301 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-203ENST00000593641 ZNF43P17038 809 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 PPOXP50336 477 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 ROR2Q01974 943 aaKnown RBP19.69■□□□□ 0.74
SSBP4-203ENST00000593641 IL17RELQ6ZVW7 336 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 LINGO2Q7L985 606 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 SERPINA11Q86U17 422 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 ANKRD42Q8N9B4 389 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 MFSD8Q8NHS3 518 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 SLC25A36Q96CQ1 311 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 SPATA9Q9BWV2 254 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 BPESC1Q9GZL8 116 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 PLK3Q9H4B4 646 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 THAP1Q9NVV9 213 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.69■□□□□ 0.74
SSBP4-203ENST00000593641 V9GYY5 206 aaPredicted RBP19.69■□□□□ 0.74
SSBP4-203ENST00000593641 NBEAL1Q6ZS30 2694 aa19.69■□□□□ 0.74
SSBP4-203ENST00000593641 A0A0G2JPF8 293 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 SLC35F4A4IF30 521 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 VSTM5A8MXK1 200 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 HNRNPCL2B2RXH8 293 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 HNRNPCL3B7ZW38 293 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 SLCO1B7G3V0H7 640 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 HNRNPCL1O60812 293 aaKnown RBP19.68■□□□□ 0.74
SSBP4-203ENST00000593641 IGLV1-44P01699 117 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 HNRNPCL4P0DMR1 293 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 PNMTP11086 282 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 CLDN17P56750 224 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 FAM169BQ8N8A8 192 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 ITCHQ96J02 903 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 RCE1Q9Y256 329 aa19.68■□□□□ 0.74
SSBP4-203ENST00000593641 ANK2Q01484 3957 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 FTCDNL1E5RQL4 147 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 IGKV3-15P01624 115 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 ZNF23P17027 643 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 CALCRP30988 508 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 RPS5P46782 204 aaKnown RBP19.67■□□□□ 0.74
SSBP4-203ENST00000593641 IDH3GP51553 393 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-203ENST00000593641 TNFAIP8L3Q5GJ75 292 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 ZNF311Q5JNZ3 666 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 C6orf10Q5SRN2 563 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 MSANTD1Q6ZTZ1 278 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 KDM8Q8N371 416 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 NUP37Q8NFH4 326 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 C19orf24Q9BVV8 132 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 NELFAQ9H3P2 528 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 ZIM2Q9NZV7 527 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 RPS6KB2Q9UBS0 482 aa19.67■□□□□ 0.74
SSBP4-203ENST00000593641 SLC43A1O75387 559 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 TGFAP01135 160 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 GTDC1Q4AE62 458 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 CROCCP2Q86T23 111 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 GPR137CQ8N3F9 429 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 ANKK1Q8NFD2 765 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 SLC35B4Q969S0 331 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 PTDSS2Q9BVG9 487 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 ZNF442Q9H7R0 627 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 SEC61A2Q9H9S3 476 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 CHST2Q9Y4C5 530 aa19.66■□□□□ 0.74
SSBP4-203ENST00000593641 RPL36A-HNRNPH2H7BZ11 118 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 hCG_2039718K7EN88 272 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 AKAP8O43823 692 aaKnown RBP19.65■□□□□ 0.74
SSBP4-203ENST00000593641 C1DQ13901 141 aaKnown RBP19.65■□□□□ 0.74
SSBP4-203ENST00000593641 SQLEQ14534 574 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 VPS33AQ96AX1 596 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 ZBTB9Q96C00 473 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 KTI12Q96EK9 354 aaPredicted RBP19.65■□□□□ 0.74
SSBP4-203ENST00000593641 ANKRD27Q96NW4 1050 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 OXGR1Q96P68 337 aa19.65■□□□□ 0.74
SSBP4-203ENST00000593641 AIM2O14862 343 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 OR2T1O43869 369 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 SNNO75324 88 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-203ENST00000593641 ZNF432O94892 652 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 STAMBPO95630 424 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 CELA3BP08861 270 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 DAOP14920 347 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 CBR1P16152 277 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 NPR2P20594 1047 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 ARR3P36575 388 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 ARF1P84077 181 aaKnown RBP19.64■□□□□ 0.73
SSBP4-203ENST00000593641 HOXC5Q00444 222 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 IL1RL1Q01638 556 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 EGR4Q05215 589 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 NPRL3Q12980 569 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 C5orf46Q6UWT4 87 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 SPATA21Q7Z572 469 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 BBS10Q8TAM1 723 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 MGARPQ8TDB4 240 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 NEU4Q8WWR8 484 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-203ENST00000593641 MAELQ96JY0 434 aaKnown RBP19.64■□□□□ 0.73
SSBP4-203ENST00000593641 PARD6BQ9BYG5 372 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 RAD21L1Q9H4I0 556 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 GPR35Q9HC97 309 aa19.64■□□□□ 0.73
SSBP4-203ENST00000593641 DYNLRB1Q9NP97 96 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms