RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CRISP3P54108 245 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 CLDN17P56750 224 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 DSTNP60981 165 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ARF1P84077 181 aaKnown RBP14.17□□□□□ -0.14
LIG1-205ENST00000593425 EGR4Q05215 589 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 LRRC74AQ0VAA2 488 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ZSWIM7Q19AV6 140 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ATG16L1Q676U5 607 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 NUP37Q8NFH4 326 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 OR4F15Q8NGB8 312 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 STK35Q8TDR2 534 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ZBTB9Q96C00 473 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 SLC25A36Q96CQ1 311 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 TMEM19Q96HH6 336 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ZBTB18Q99592 522 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 RAB1BQ9H0U4 201 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 ZNF442Q9H7R0 627 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 B3GAT1Q9P2W7 334 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 A0A096LPI6 279 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 TMEM129A0AVI4 362 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 OR6C65A6NJZ3 312 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 LILRA1O75019 489 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 DAOP14920 347 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 CRATP43155 626 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 SH3BGRP55822 239 aaPredicted RBP14.16□□□□□ -0.14
LIG1-205ENST00000593425 HOXC5Q00444 222 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 SQLEQ14534 574 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 LARS2Q15031 903 aaKnown RBP14.16□□□□□ -0.14
LIG1-205ENST00000593425 SVOPLQ8N434 492 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 FAM169BQ8N8A8 192 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 ZNF540Q8NDQ6 660 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 MFSD8Q8NHS3 518 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 VPS33AQ96AX1 596 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 ZNF837Q96EG3 531 aaPredicted RBP14.16□□□□□ -0.14
LIG1-205ENST00000593425 DOK1Q99704 481 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 SPATA9Q9BWV2 254 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 TPT1P8Q9HAU6 139 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 CALML5Q9NZT1 146 aa14.16□□□□□ -0.14
LIG1-205ENST00000593425 IGHV2OR16-5A0A0B4J2B6 119 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 RPL36A-HNRNPH2H7BZ11 118 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 TACSTD2P09758 323 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
LIG1-205ENST00000593425 CBR1P16152 277 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 NPR2P20594 1047 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 GIFP27352 417 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 SPATA21Q7Z572 469 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 CDK20Q8IZL9 346 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 MREGQ8N565 214 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 GLB1L3Q8NCI6 653 aaPredicted RBP14.15□□□□□ -0.14
LIG1-205ENST00000593425 KTI12Q96EK9 354 aaPredicted RBP14.15□□□□□ -0.14
LIG1-205ENST00000593425 C1orf159Q96HA4 380 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 GPR35Q9HC97 309 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 PRDM4Q9UKN5 801 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 RCE1Q9Y256 329 aa14.15□□□□□ -0.14
LIG1-205ENST00000593425 SH3PXD2BA1X283 911 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 FZD7O75084 574 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 SEC14L2O76054 403 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 NUDT7P0C024 238 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 ZNF43P17038 809 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 CHN2P52757 468 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 NPRL3Q12980 569 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 TRIP10Q15642 601 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 CEACAM16Q2WEN9 425 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 PDCD4Q53EL6 469 aaKnown RBP14.14□□□□□ -0.15
LIG1-205ENST00000593425 TNFAIP8L3Q5GJ75 292 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 WDR93Q6P2C0 686 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 NEU4Q8WWR8 484 aaPredicted RBP14.14□□□□□ -0.15
LIG1-205ENST00000593425 OXGR1Q96P68 337 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 SNX18Q96RF0 628 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 PAIP2Q9BPZ3 127 aaKnown RBP14.14□□□□□ -0.15
LIG1-205ENST00000593425 MOV10Q9HCE1 1003 aaKnown RBP14.14□□□□□ -0.15
LIG1-205ENST00000593425 KCNK9Q9NPC2 374 aa14.14□□□□□ -0.15
LIG1-205ENST00000593425 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.14□□□□□ -0.15
LIG1-205ENST00000593425 V9GYY5 206 aaPredicted RBP14.14□□□□□ -0.15
LIG1-205ENST00000593425 A0A0G2JPF8 293 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 HNRNPCL2B2RXH8 293 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 HNRNPCL3B7ZW38 293 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 LYNX1G3V0Z9 82 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 M0R082 166 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 HDAC3O15379 428 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 HNRNPCL1O60812 293 aaKnown RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 SLC43A1O75387 559 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ANP32DO95626 131 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 IL6P05231 212 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZCCHC18P0CG32 403 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 HNRNPCL4P0DMR1 293 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 LYNX1P0DP58 116 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 KITP10721 976 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 APEX1P27695 318 aaKnown RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 GTF2E2P29084 291 aaKnown RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 SNTB2Q13425 540 aaKnown RBP14.13□□□□□ -0.15
LIG1-205ENST00000593425 ADRM1Q16186 407 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 MSMPQ1L6U9 139 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZNF311Q5JNZ3 666 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 PHYHD1Q5SRE7 291 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 LIPNQ5VXI9 398 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 KRT80Q6KB66 452 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 MDP1Q86V88 176 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 ZNF786Q8N393 782 aa14.13□□□□□ -0.15
LIG1-205ENST00000593425 GPR137CQ8N3F9 429 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms