RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 OR1K1Q8NGR3 316 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 SPATA3Q8NHX4 192 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 BBS10Q8TAM1 723 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 FBXO17Q96EF6 278 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 BOD1Q96IK1 185 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 ALKBH3Q96Q83 286 aaPredicted RBP16.02■□□□□ 0.16
CIRBP-237ENST00000592234 KCNS3Q9BQ31 491 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 TMEM120AQ9BXJ8 343 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 RASD1Q9Y272 281 aa16.02■□□□□ 0.16
CIRBP-237ENST00000592234 OR6C65A6NJZ3 312 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 TMEM229AB2RXF0 380 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 NPIPB7O75200 414 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 LGI1O95970 557 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 CSF3P09919 207 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 GTF2E2P29084 291 aaKnown RBP16.01■□□□□ 0.15
CIRBP-237ENST00000592234 EFNA4P52798 201 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 UBE2NP61088 152 aaKnown RBP16.01■□□□□ 0.15
CIRBP-237ENST00000592234 LGALS3BPQ08380 585 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 C6orf52Q5T4I8 152 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 DHDDSQ86SQ9 333 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 MFSD8Q8NHS3 518 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 SLC25A36Q96CQ1 311 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 SLC38A2Q96QD8 506 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 RABEP2Q9H5N1 569 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 ZNF385DQ9H6B1 395 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 RPS6KB2Q9UBS0 482 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 LEF1Q9UJU2 399 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-237ENST00000592234 TRIM33Q9UPN9 1127 aa16.01■□□□□ 0.15
CIRBP-237ENST00000592234 TRBV5-3A0A0A0MS03 114 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 IGHV1-18A0A0C4DH31 117 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 ARAFP10398 606 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 PNMTP11086 282 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 BMP2P12643 396 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 PAX7P23759 505 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 RPS5P46782 204 aaKnown RBP16■□□□□ 0.15
CIRBP-237ENST00000592234 EPHX4Q8IUS5 362 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 C10orf105Q8TEF2 133 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 CPPED1Q9BRF8 314 aaPredicted RBP16■□□□□ 0.15
CIRBP-237ENST00000592234 BCL2L10Q9HD36 194 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 FGFR1OP2Q9NVK5 253 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 NDUFAF1Q9Y375 327 aa16■□□□□ 0.15
CIRBP-237ENST00000592234 EVPLLA8MZ36 301 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 FTCDNL1E5RQL4 147 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 ANGPT2O15123 496 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 UPK3AO75631 287 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 LY6HO94772 140 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
CIRBP-237ENST00000592234 PPIBP23284 216 aaKnown RBP15.99■□□□□ 0.15
CIRBP-237ENST00000592234 AQP1P29972 269 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 VLDLRP98155 873 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 CDK6Q00534 326 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 SCARB2Q14108 478 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 SELPLGQ14242 412 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 SWI5Q1ZZU3 235 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 DLEU7Q6UYE1 221 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 LINGO2Q7L985 606 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 KDM8Q8N371 416 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 NANOS1Q8WY41 292 aaKnown RBP15.99■□□□□ 0.15
CIRBP-237ENST00000592234 PROX1Q92786 737 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 PTDSS2Q9BVG9 487 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 LINC00470Q9BZP3 86 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 FKBP7Q9Y680 259 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 MALRD1Q5VYJ5 2156 aa15.99■□□□□ 0.15
CIRBP-237ENST00000592234 A0A096LPE4 126 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 A0A1W2PPZ6 126 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 CRYAAP02489 173 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 VIMP08670 466 aaKnown RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 TROVE2P10155 538 aaKnown RBP eCLIP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 ZNF43P17038 809 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 CLDN17P56750 224 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 MTPNP58546 118 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 SNRPD2P62316 118 aaKnown RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 TUBA1BP68363 451 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 TUBA4AP68366 448 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 EGR4Q05215 589 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 NFYCQ13952 458 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 RUNDC3AQ59EK9 446 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 CGB2Q6NT52 195 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 TUBA1AQ71U36 451 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 STON2Q8WXE9 905 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 BCL2L2Q92843 193 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 KTI12Q96EK9 354 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 ZNF317Q96PQ6 595 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 KCNK17Q96T54 332 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 SIKE1Q9BRV8 207 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 KATNB1Q9BVA0 655 aa15.98■□□□□ 0.15
CIRBP-237ENST00000592234 RSPO3Q9BXY4 272 aaPredicted RBP15.98■□□□□ 0.15
CIRBP-237ENST00000592234 MXRA5Q9NR99 2828 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 ARPC4-TTLL3A0A0A6YYG9 625 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 RNF212BA8MTL3 300 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 ETS2P15036 469 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 USF1P22415 310 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-237ENST00000592234 ARFIP2P53365 341 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 SH3BGRP55822 239 aaPredicted RBP15.97■□□□□ 0.15
CIRBP-237ENST00000592234 ROR2Q01974 943 aaKnown RBP15.97■□□□□ 0.15
CIRBP-237ENST00000592234 MST1LQ2TV78 715 aa15.97■□□□□ 0.15
CIRBP-237ENST00000592234 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms