RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 DAG1Q14118 895 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 ELFN2Q5R3F8 820 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 PEG10Q86TG7 708 aaKnown RBP13.72□□□□□ -0.21
DDX39A-216ENST00000591275 RNF130Q86XS8 419 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 KDM8Q8N371 416 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 CADM2Q8N3J6 435 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 FAM169BQ8N8A8 192 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 APOPT1Q96IL0 206 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 LRRC37BQ96QE4 947 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 PPCSQ9HAB8 311 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 NOX3Q9HBY0 568 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 RLIMQ9NVW2 624 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 TREM2Q9NZC2 230 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 PCDHB10Q9UN67 800 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 SPEF1Q9Y4P9 236 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
DDX39A-216ENST00000591275 TMEM229AB2RXF0 380 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 FRS3O43559 492 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 SEC14L2O76054 403 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 MSMBP08118 114 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 COL8A2P25067 703 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 GPR6P46095 362 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 CAPZA2P47755 286 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 CLDN17P56750 224 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 MSMPQ1L6U9 139 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 ANXA8L1Q5VT79 327 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 FAHD2BQ6P2I3 314 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 MDP1Q86V88 176 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 FAM216AQ8WUB2 273 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 ZNF837Q96EG3 531 aaPredicted RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 FAHD2AQ96GK7 314 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 ATP6V1G3Q96LB4 118 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 TRNT1Q96Q11 434 aaKnown RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 LINC00470Q9BZP3 86 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 DPY30Q9C005 99 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 MOV10Q9HCE1 1003 aaKnown RBP13.71□□□□□ -0.21
DDX39A-216ENST00000591275 ASIC5Q9NY37 505 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 GRIP1Q9Y3R0 1128 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 CMAHPQ9Y471 501 aa13.71□□□□□ -0.21
DDX39A-216ENST00000591275 A8MVM7 634 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 TRIM77I1YAP6 450 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 SPAG7O75391 227 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 VAMP5O95183 116 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 HPXP02790 462 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 SAGP10523 405 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 RPS4Y1P22090 263 aaKnown RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 HILS1P60008 231 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 GNA13Q14344 377 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 PDCD2Q16342 344 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 GSTA3Q16772 222 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 SPANXN4Q5MJ08 99 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 C1orf140Q5VVS0 124 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 LRRC74BQ6ZQY2 392 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 VPS37AQ8NEZ2 397 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 MRPL37Q9BZE1 423 aaKnown RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-216ENST00000591275 GPR35Q9HC97 309 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 REV1Q9UBZ9 1251 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 RASD1Q9Y272 281 aa13.7□□□□□ -0.22
DDX39A-216ENST00000591275 TLDC2A0PJX2 215 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 M0R233 179 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-216ENST00000591275 SYNGR3O43761 229 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 DBIP07108 87 aaKnown RBP13.69□□□□□ -0.22
DDX39A-216ENST00000591275 NR2F1P10589 423 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 CREB1P16220 341 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 EPHA1P21709 976 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 NR4A1P22736 598 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 ARR3P36575 388 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 ACAA2P42765 397 aaKnown RBP13.69□□□□□ -0.22
DDX39A-216ENST00000591275 ALDH3B1P43353 468 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 CEACAM16Q2WEN9 425 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 CEP85LQ5SZL2 805 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 ZNF440Q8IYI8 595 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 GPR137CQ8N3F9 429 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
DDX39A-216ENST00000591275 MRPL24Q96A35 216 aaKnown RBP13.69□□□□□ -0.22
DDX39A-216ENST00000591275 SLC25A36Q96CQ1 311 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 SYT3Q9BQG1 590 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 AKTIPQ9H8T0 292 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 MKS1Q9NXB0 559 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 SEC14L4Q9UDX3 406 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
DDX39A-216ENST00000591275 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 CDHR4A6H8M9 788 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 RPL36A-HNRNPH2H7BZ11 118 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 SLC43A1O75387 559 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 TFPTP0C1Z6 253 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 GAAP10253 952 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 PNMTP11086 282 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 PRG2P13727 222 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 SERPINB5P36952 375 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 SEC24CP53992 1094 aa13.68□□□□□ -0.22
DDX39A-216ENST00000591275 COPZ1P61923 177 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms