RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 OXGR1Q96P68 337 aa18.89■□□□□ 0.61
ATG4D-212ENST00000590096 TRIM15Q9C019 465 aa18.89■□□□□ 0.61
ATG4D-212ENST00000590096 MEPEQ9NQ76 525 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-212ENST00000590096 MRPL39Q9NYK5 338 aaKnown RBP18.89■□□□□ 0.61
ATG4D-212ENST00000590096 NDUFAF4Q9P032 175 aa18.89■□□□□ 0.61
ATG4D-212ENST00000590096 PKDREJQ9NTG1 2253 aa18.89■□□□□ 0.61
ATG4D-212ENST00000590096 MYO9AB2RTY4 2548 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 TUBAL3A6NHL2 446 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 OR6A2O95222 327 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 SEMG1P04279 462 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 HIST1H2ABP04908 130 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 FABP3P05413 133 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 CBX1P83916 185 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 MS4A2Q01362 244 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 C1DQ13901 141 aaKnown RBP18.88■□□□□ 0.61
ATG4D-212ENST00000590096 HIST3H2AQ7L7L0 130 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.88■□□□□ 0.61
ATG4D-212ENST00000590096 TSEN54Q7Z6J9 526 aaKnown RBP18.88■□□□□ 0.61
ATG4D-212ENST00000590096 KDM8Q8N371 416 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 HIST1H2ACQ93077 130 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 POP5Q969H6 163 aaKnown RBP18.88■□□□□ 0.61
ATG4D-212ENST00000590096 TMEM45BQ96B21 275 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 SGTBQ96EQ0 304 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 ANKRD19PQ9H560 264 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 MAN2C1Q9NTJ4 1040 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 ZNF229Q9UJW7 825 aa18.88■□□□□ 0.61
ATG4D-212ENST00000590096 ADGRG4Q8IZF6 3080 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 C16orf97H3BN30 126 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 PRSS23O95084 383 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 IGF2P01344 180 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 H1F0P07305 194 aaKnown RBP18.87■□□□□ 0.61
ATG4D-212ENST00000590096 UGT2B10P36537 528 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 TRAP1Q12931 704 aaKnown RBP18.87■□□□□ 0.61
ATG4D-212ENST00000590096 CREB3L2Q70SY1 520 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 AAED1Q7RTV5 226 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 UEVLDQ8IX04 471 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 UBE2J2Q8N2K1 259 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 PIK3C3Q8NEB9 887 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 ZNF385AQ96PM9 386 aaKnown RBP18.87■□□□□ 0.61
ATG4D-212ENST00000590096 SEPHS2Q99611 448 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 PIP5K1AQ99755 562 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 NMNAT1Q9HAN9 279 aaPredicted RBP18.87■□□□□ 0.61
ATG4D-212ENST00000590096 NDRG3Q9UGV2 375 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 PRSS50Q9UI38 385 aa18.87■□□□□ 0.61
ATG4D-212ENST00000590096 CREBBPQ92793 2442 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 FREM1Q5H8C1 2179 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 DIRAS1O95057 198 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 CNOT4O95628 575 aaKnown RBP18.86■□□□□ 0.61
ATG4D-212ENST00000590096 ADORA3P0DMS8 318 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 AHCYP23526 432 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 PUDPQ08623 228 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 FGD3Q5JSP0 725 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 PGM2L1Q6PCE3 622 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 ZNF730Q6ZMV8 503 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 Q6ZT83 130 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 RRM2BQ7LG56 351 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 NANOGNBQ7Z5D8 188 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 GABRG1Q8N1C3 465 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 ZIC4Q8N9L1 334 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 ACOT11Q8WXI4 607 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-212ENST00000590096 IL1RAPQ9NPH3 570 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 B3GAT1Q9P2W7 334 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 KCNN3Q9UGI6 736 aa18.86■□□□□ 0.61
ATG4D-212ENST00000590096 ANKHD1Q8IWZ3 2542 aaKnown RBP18.85■□□□□ 0.61
ATG4D-212ENST00000590096 LOC102725191A0A1B0GVB3 256 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 TCRBV5S2A0A599 114 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 HTR3EA5X5Y0 456 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 MS4A18H0YCH9 400 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 PLPP3O14495 311 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 GSC2O15499 205 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 AKAP8O43823 692 aaKnown RBP18.85■□□□□ 0.61
ATG4D-212ENST00000590096 PIP5K1CO60331 668 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 OR7A10O76100 309 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 ADAP00813 363 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 IFI30P13284 250 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 FUT1P19526 365 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 EDNRAP25101 427 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 NTF4P34130 210 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CLDN17P56750 224 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 SMIM11AP58511 58 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 P2RY6Q15077 328 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 MS4A18Q3C1V0 323 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 FBXW9Q5XUX1 488 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CCDC121Q6ZUS5 278 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 SLC46A3Q7Z3Q1 461 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CXorf67Q86X51 503 aaPredicted RBP18.85■□□□□ 0.61
ATG4D-212ENST00000590096 EPHX4Q8IUS5 362 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 ZDHHC21Q8IVQ6 265 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 NRMQ8IXM6 262 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 RNF113BQ8IZP6 322 aaKnown RBP18.85■□□□□ 0.61
ATG4D-212ENST00000590096 LRRC17Q8N6Y2 441 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 LINC01560Q8TB33 94 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CADM1Q9BY67 442 aaKnown RBP18.85■□□□□ 0.61
ATG4D-212ENST00000590096 MAGIXQ9H6Y5 334 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 C20orf141Q9NUB4 165 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CRIM1Q9NZV1 1036 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 UPB1Q9UBR1 384 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 GPR52Q9Y2T5 361 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 NOX1Q9Y5S8 564 aa18.85■□□□□ 0.61
ATG4D-212ENST00000590096 CACNA1DQ01668 2161 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms