RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CYLC2Q14093 348 aaPredicted RBP12.58□□□□□ -0.4
MBD1-220ENST00000589758 RAB35Q15286 201 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 PRIMA1Q86XR5 153 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 MFSD8Q8NHS3 518 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 RHNO1Q9BSD3 238 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 C1QTNF6Q9BXI9 259 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 OBP2BQ9NPH6 170 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 CHST2Q9Y4C5 530 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 ATP23Q9Y6H3 246 aa12.58□□□□□ -0.4
MBD1-220ENST00000589758 NSD1Q96L73 2696 aaPredicted RBP12.58□□□□□ -0.4
MBD1-220ENST00000589758 BBIP1A8MTZ0 92 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 ZNF587BE7ETH6 402 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 SLC22A2O15244 555 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 NPIPB7O75200 414 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 CRLF1O75462 422 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 ARAFP10398 606 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 COX4I1P13073 169 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 GPX2P18283 190 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 PTNP21246 168 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
MBD1-220ENST00000589758 P2RY4P51582 365 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 NUDT6P53370 316 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 CHRNB3Q05901 458 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 CYP51A1Q16850 503 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
MBD1-220ENST00000589758 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 B3GLCTQ6Y288 498 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 TREML1Q86YW5 311 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 RCN3Q96D15 328 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 C12orf10Q9HB07 376 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 RPS6KB2Q9UBS0 482 aa12.57□□□□□ -0.4
MBD1-220ENST00000589758 ELOA3DA6NLF2 546 aaPredicted RBP12.56□□□□□ -0.4
MBD1-220ENST00000589758 FTCDNL1E5RQL4 147 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 H7C417 338 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 AIM2O14862 343 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 CD5LO43866 347 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 OR2T1O43869 369 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 CDH2P19022 906 aaPredicted RBP12.56□□□□□ -0.4
MBD1-220ENST00000589758 AQP1P29972 269 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 PRKAR1BP31321 381 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
MBD1-220ENST00000589758 SLC25A3Q00325 362 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 CDK6Q00534 326 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 SCARB2Q14108 478 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 ELOA3BQ3SY89 546 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 NANOGP8Q6NSW7 305 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 NIPAL3Q6P499 406 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 CLEC2AQ6UVW9 174 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 PCYOX1LQ8NBM8 494 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 ELOA3Q8NG57 546 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 RP9Q8TA86 221 aaKnown RBP12.56□□□□□ -0.4
MBD1-220ENST00000589758 SLC25A36Q96CQ1 311 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 SPATA5L1Q9BVQ7 753 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 NANOGQ9H9S0 305 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
MBD1-220ENST00000589758 GMEB1Q9Y692 573 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
MBD1-220ENST00000589758 PNMTP11086 282 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 SLC6A2P23975 617 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
MBD1-220ENST00000589758 SELENOPP49908 381 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 UBE2NP61088 152 aaKnown RBP12.55□□□□□ -0.4
MBD1-220ENST00000589758 EGR4Q05215 589 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 RABL3Q5HYI8 236 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 COQ5Q5HYK3 327 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 REEP3Q6NUK4 255 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 C6orf89Q6UWU4 347 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 KRT73Q86Y46 540 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 EPHX4Q8IUS5 362 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 LSMEM1Q8N8F7 131 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 OR10A6Q8NH74 314 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 MAGEE2Q8TD90 523 aaPredicted RBP12.55□□□□□ -0.4
MBD1-220ENST00000589758 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
MBD1-220ENST00000589758 KCNS3Q9BQ31 491 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 MYLK2Q9H1R3 596 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 TMEM38AQ9H6F2 299 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 GID8Q9NWU2 228 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
MBD1-220ENST00000589758 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
MBD1-220ENST00000589758 CR1P17927 2039 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 FXYD1O00168 92 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 FZD7O75084 574 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 SLC25A16P16260 332 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 ZNF43P17038 809 aa12.54□□□□□ -0.4
MBD1-220ENST00000589758 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
MBD1-220ENST00000589758 ADRM1Q16186 407 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms