RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TPRKBQ9Y3C4 175 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 IER3IP1Q9Y5U9 82 aa20.03■□□□□ 0.8
ATG4D-209ENST00000588857 SH3D21A4FU49 640 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 RIIAD1A6NNX1 92 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 LINC01387J3KSC0 135 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 ACOT7O00154 380 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 EEF1B2P24534 225 aaKnown RBP20.02■□□□□ 0.8
ATG4D-209ENST00000588857 SHC1P29353 583 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 MAGEA5P43359 124 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 OR2B6P58173 313 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 OCLNQ16625 522 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 SOWAHCQ53LP3 525 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-209ENST00000588857 IGFL3Q6UXB1 125 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 H1FNTQ75WM6 255 aaPredicted RBP20.02■□□□□ 0.8
ATG4D-209ENST00000588857 TSPAN14Q8NG11 270 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 KATNB1Q9BVA0 655 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 NRIP3Q9NQ35 241 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 TAS2R5Q9NYW4 299 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 SEC14L4Q9UDX3 406 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 TRAPPC4Q9Y296 219 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 GPR52Q9Y2T5 361 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 MGAQ8IWI9 3026 aa20.02■□□□□ 0.8
ATG4D-209ENST00000588857 A0A1W2PNR3 127 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 MKRN2OSH3BPM6 223 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 SULT2B1O00204 365 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 PLPP3O14495 311 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 IDH3BO43837 385 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 XPNPEP2O43895 674 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 IFNGP01579 166 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 F13BP05160 661 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 CD14P08571 375 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 AHCYP23526 432 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 CTXN1P60606 82 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 ERVK-25P63136 954 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 TMEM201Q5SNT2 666 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 SLC25A30Q5SVS4 291 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 MEDAGQ5VYS4 303 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 TMEM154Q6P9G4 183 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 LRR1Q96L50 414 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 BBC3Q96PG8 261 aaPredicted RBP20.01■□□□□ 0.79
ATG4D-209ENST00000588857 CMC2Q9NRP2 79 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 QPCTLQ9NXS2 382 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 DNAJC27Q9NZQ0 273 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 ADAM18Q9Y3Q7 739 aa20.01■□□□□ 0.79
ATG4D-209ENST00000588857 PTGES3LE9PB15 166 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 C11orf98E9PRG8 122 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 ARPC3O15145 178 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 RNF13O43567 381 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 ENTPD6O75354 484 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 SLC2A10O95528 541 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 SLC35A1P78382 337 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 TMPPEQ6ZT21 453 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 LRRC75AQ8NAA5 344 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 MIB2Q96AX9 1013 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 KLHL15Q96M94 604 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 CHST11Q9NPF2 352 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 INIPQ9NRY2 104 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 B3GALT5Q9Y2C3 310 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 CACNA1GO43497 2377 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 SNTNA6NMZ2 147 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 ERVH48-1M5A8F1 160 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 PMS2P2O95744 297 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 APEHP13798 732 aaKnown RBP20■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF3P17036 446 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 POU3F2P20265 443 aaPredicted RBP20■□□□□ 0.79
ATG4D-209ENST00000588857 CD97P48960 835 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 DIO1P49895 249 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 NUDT6P53370 316 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 GABARAPL2P60520 117 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 C19orf57Q0VDD7 668 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 FAM109AQ8N4B1 249 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 ZNF540Q8NDQ6 660 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 OTULINQ96BN8 352 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 PLCXD1Q9NUJ7 323 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 GRHPRQ9UBQ7 328 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 KLHL21Q9UJP4 597 aa20■□□□□ 0.79
ATG4D-209ENST00000588857 KIAA1549Q9HCM3 1950 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 AKR7A3O95154 331 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 CELA3AP09093 270 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 GFRA1P56159 465 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 CSNK2A1P68400 391 aaPredicted RBP19.99■□□□□ 0.79
ATG4D-209ENST00000588857 PUDPQ08623 228 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 LSM14AQ8ND56 463 aaKnown RBP19.99■□□□□ 0.79
ATG4D-209ENST00000588857 ANKK1Q8NFD2 765 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 FN3KQ9H479 309 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 AMBNQ9NP70 447 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 PCDHGB7Q9Y5F8 929 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 IGSF10Q6WRI0 2623 aa19.99■□□□□ 0.79
ATG4D-209ENST00000588857 SMG1Q96Q15 3661 aaKnown RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 TRIM64A6NGJ6 449 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 IMPA2O14732 288 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 ATXN7O15265 892 aaPredicted RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 FZD7O75084 574 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 PAICSP22234 425 aaKnown RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 CDH15P55291 814 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 ZP4Q12836 540 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 SLC10A1Q14973 349 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 PCSK4Q6UW60 755 aa19.98■□□□□ 0.79
ATG4D-209ENST00000588857 CXXC5Q7LFL8 322 aaKnown RBP19.98■□□□□ 0.79
ATG4D-209ENST00000588857 BCDIN3DQ7Z5W3 292 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms