RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CRMP1Q14194 572 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 TMEM176BQ3YBM2 270 aaPredicted RBP23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 PRSS48Q7RTY5 328 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 OR14L1PQ8NHC6 308 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 C5orf34Q96MH7 638 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 OR5B2Q96R09 309 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 HCAR1Q9BXC0 346 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 TTTY12Q9BZ98 90 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 RPL36Q9Y3U8 105 aaKnown RBP23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 CSAG2Q9Y5P2 127 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 ANKRD11Q6UB99 2663 aaPredicted RBP23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 EFCAB10A6NFE3 127 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 TXNDC12O95881 172 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 MT-ND2P03891 347 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 ZNF3P17036 446 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 ALDH3B2P48448 385 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 MVKQ03426 396 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 ITGADQ13349 1161 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 PLBD1Q6P4A8 553 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 KCTD8Q6ZWB6 473 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 PTP4A1Q93096 173 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 RASD2Q96D21 266 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 NDEL1Q9GZM8 345 aa23.4■■□□□ 1.34
SCAMP4-210ENST00000588555 KLRC4-KLRK1H3BQV0 150 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 GLSO94925 669 aaPredicted RBP23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 IFNGP01579 166 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 CDK1P06493 297 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 RFC3P40938 356 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 MEOX1P50221 254 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 RAC1P63000 192 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 ZNF766Q5HY98 468 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 XAF1Q6GPH4 301 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 H1FNTQ75WM6 255 aaPredicted RBP23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 SPACA3Q8IXA5 215 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 SLC37A3Q8NCC5 494 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 OR52E2Q8NGJ4 325 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 OR4K13Q8NH42 304 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 MYDGFQ969H8 173 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 Q96M85 177 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 TSPAN32Q96QS1 320 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 DDOQ99489 341 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 MED20Q9H944 212 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 KLHL21Q9UJP4 597 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 PCDHGB1Q9Y5G3 927 aa23.39■■□□□ 1.33
SCAMP4-210ENST00000588555 IMPA2O14732 288 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 HPNP05981 417 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 ADRA2AP08913 450 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 PCMT1P22061 227 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 C21orf33P30042 268 aaPredicted RBP23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 SDHAP31040 664 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 ST3GAL4Q11206 333 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 ZP4Q12836 540 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 HYAL4Q2M3T9 481 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 ZFP62Q8NB50 900 aaPredicted RBP23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 CYB561A3Q8NBI2 242 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 SDR9C7Q8NEX9 313 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 MIB2Q96AX9 1013 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 DTNBP1Q96EV8 351 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 SMAD5Q99717 465 aaKnown RBP23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 CCDC90BQ9GZT6 254 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 CHST11Q9NPF2 352 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 MRPS18AQ9NVS2 196 aaKnown RBP23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 B4GALT7Q9UBV7 327 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 TRAPPC4Q9Y296 219 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 MGAQ8IWI9 3026 aa23.38■■□□□ 1.33
SCAMP4-210ENST00000588555 TEX13CA0A0J9YWL9 993 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 PRR23D1E9PI22 279 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 C11orf98E9PRG8 122 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 MS4A18H0YCH9 400 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 TRAPPC6AO75865 159 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 STSP08842 583 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 PRR23D2P0DMB1 279 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 GTF2E2P29084 291 aaKnown RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 CDH11P55287 796 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 MS4A18Q3C1V0 323 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 WIPI1Q5MNZ9 446 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 NIPAL3Q6P499 406 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 LSM14AQ8ND56 463 aaKnown RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 RFKQ969G6 155 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 INIPQ9NRY2 104 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 B3GALT5Q9Y2C3 310 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 SNX5Q9Y5X3 404 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 SNTNA6NMZ2 147 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 RNF13O43567 381 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 AKR7A3O95154 331 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 EIF2S3P41091 472 aaKnown RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 DIO1P49895 249 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 P2RY4P51582 365 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 GFRA1P56159 465 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 EMX1Q04741 257 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 PUDPQ08623 228 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 DBPQ10586 325 aaPredicted RBP23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 NADK2Q4G0N4 442 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 CCDC81Q6ZN84 652 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 TMPPEQ6ZT21 453 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 TMEM178AQ8NBL3 297 aa23.37■■□□□ 1.33
SCAMP4-210ENST00000588555 NPEPL1Q8NDH3 523 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms