RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PRG2P13727 222 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 NID1P14543 1247 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ARSBP15848 533 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 BMP7P18075 431 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF10P21506 573 aaPredicted RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 THBS2P35442 1172 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 FOLR3P41439 243 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 RRAS2P62070 204 aaPredicted RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 SSPNQ14714 243 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 OR1Q1Q15612 314 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 MAPK14Q16539 360 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 MRPL2Q5T653 305 aaKnown RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF57Q68EA5 555 aaPredicted RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 TMPRSS11FQ6ZWK6 438 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 GPALPP1Q8IXQ4 340 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 OR4M2Q8NGB6 313 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 OR5W2Q8NH69 310 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 STT3BQ8TCJ2 826 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 SPSB2Q99619 263 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 HCAR1Q9BXC0 346 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 PRORYQ9H606 182 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 MED20Q9H944 212 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 C14orf105Q9NVL8 296 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ING3Q9NXR8 418 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 DAPP1Q9UN19 280 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ZC3H12DA2A288 527 aaKnown RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 NKX2-8O15522 239 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 B3GALT2O43825 422 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 STX11O75558 287 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 MT-ND5P03915 603 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 TLX1P31314 330 aaPredicted RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 RFX3P48380 749 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ATP12AP54707 1039 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 TAS2R43P59537 309 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 BTG1P62324 171 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 MAT1AQ00266 395 aaKnown RBP13.35□□□□□ -0.27
CCDC43-203ENST00000588210 RUNX2Q13950 521 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 ERV3-1Q14264 604 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 VWA2Q5GFL6 755 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 DCST2Q5T1A1 773 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 B3GLCTQ6Y288 498 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 NACC2Q96BF6 587 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 WACQ9BTA9 647 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 CDHR4A6H8M9 788 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 INMT-MINDY4F8WBC2 141 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 PLPP2O43688 288 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 RDH16O75452 317 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 ALX3O95076 343 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 FUT1P19526 365 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 TALDO1P37837 337 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 CAPZA2P47755 286 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 GALK2Q01415 458 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 SLC37A3Q8NCC5 494 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 OR10H4Q8NGA5 316 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 OR4M1Q8NGD0 313 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 OR51Q1Q8NH59 317 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 ART5Q96L15 291 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 STACQ99469 402 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 TBX5Q99593 518 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 ENKD1Q9H0I2 346 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 FOLH1BQ9HBA9 442 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 RPRD1BQ9NQG5 326 aaKnown RBP13.34□□□□□ -0.27
CCDC43-203ENST00000588210 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 ZZEF1O43149 2961 aa13.34□□□□□ -0.27
CCDC43-203ENST00000588210 A0A087WV62 115 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 PRR23D1E9PI22 279 aaPredicted RBP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 PLOD3O60568 738 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 EIF4EP06730 217 aaKnown RBP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 GKN3PP0CG01 181 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 PRR23D2P0DMB1 279 aaPredicted RBP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 HK1P19367 917 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 SLC6A1P30531 599 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 RAB25P57735 213 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 SFXN4Q6P4A7 337 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 OAFQ86UD1 273 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 CDRT4Q8N9R6 151 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 AKAP1Q92667 903 aaKnown RBP eCLIP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 RFT1Q96AA3 541 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 PPIL3Q9H2H8 161 aaKnown RBP13.33□□□□□ -0.27
CCDC43-203ENST00000588210 MCUBQ9NWR8 336 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 HCN3Q9P1Z3 774 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 KCNE5Q9UJ90 142 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 SIGLEC7Q9Y286 467 aa13.33□□□□□ -0.27
CCDC43-203ENST00000588210 USP24Q9UPU5 2620 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 A0A0G2JK05 382 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 ZNF860A6NHJ4 632 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 SC5DO75845 299 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 AK1P00568 194 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 IGHEP01854 428 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 ATP1B1P05026 303 aa13.33□□□□□ -0.28
CCDC43-203ENST00000588210 UMODP07911 640 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms