RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 SEC61A2Q9H9S3 476 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 VAPAQ9P0L0 249 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 B3GAT1Q9P2W7 334 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 RPS6KB2Q9UBS0 482 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 ABCA1O95477 2261 aa12.5□□□□□ -0.41
VMP1-206ENST00000587945 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
VMP1-206ENST00000587945 M0R082 166 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 TGDSO95455 350 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 ZNF43P17038 809 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 AQP1P29972 269 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 GRPRP30550 384 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 EFNA4P52798 201 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 AQP5P55064 265 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 SWI5Q1ZZU3 235 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 TMEM249Q2WGJ8 235 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 HMBOX1Q6NT76 420 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 ANKRD16Q6P6B7 361 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 C6orf89Q6UWU4 347 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 ZNF417Q8TAU3 575 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 RNF217Q8TC41 542 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 FAM168AQ92567 244 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
VMP1-206ENST00000587945 TNFRSF13CQ96RJ3 184 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 ZNF587Q96SQ5 575 aaPredicted RBP12.49□□□□□ -0.41
VMP1-206ENST00000587945 WFDC6Q9BQY6 131 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 CCDC28BQ9BUN5 200 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 LINC00470Q9BZP3 86 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 PMF1-BGLAPU3KQ54 211 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
VMP1-206ENST00000587945 FBN1P35555 2871 aaKnown RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 OR6C65A6NJZ3 312 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 ZNF432O94892 652 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 CELA3BP08861 270 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 CECR9P0C854 216 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 BMP4P12644 408 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 NAAAQ02083 359 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 LOXL1Q08397 574 aaPredicted RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 C1DQ13901 141 aaKnown RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 AGKQ53H12 422 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 ALG10BQ5I7T1 473 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 C6orf52Q5T4I8 152 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 C1QTNF12Q5T7M4 302 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 REEP3Q6NUK4 255 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 DHRS4L2Q6PKH6 230 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 HIPK1Q86Z02 1210 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 LSMEM1Q8N8F7 131 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 OXGR1Q96P68 337 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 SORCS2Q96PQ0 1159 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 KCNS3Q9BQ31 491 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
VMP1-206ENST00000587945 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.48□□□□□ -0.41
VMP1-206ENST00000587945 TRAV36DV7A0A075B6V5 113 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 TRBV5-3A0A0A0MS03 114 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 ARPC4-TTLL3A0A0A6YYG9 625 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 AIM2O14862 343 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 TPST2O60704 377 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 SLC43A1O75387 559 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 SEC14L2O76054 403 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 HPRP00739 348 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
VMP1-206ENST00000587945 SLC25A16P16260 332 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 CALCRP30988 508 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 SERPINF1P36955 418 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 SCARB2Q14108 478 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 ADRM1Q16186 407 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 TTMPQ5BVD1 217 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 FAM69AQ5T7M9 428 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 CARD17Q5XLA6 110 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
VMP1-206ENST00000587945 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
VMP1-206ENST00000587945 KRT73Q86Y46 540 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 MAGEE2Q8TD90 523 aaPredicted RBP12.47□□□□□ -0.41
VMP1-206ENST00000587945 DNAJA4Q8WW22 397 aaPredicted RBP12.47□□□□□ -0.41
VMP1-206ENST00000587945 SLC38A4Q969I6 547 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 KATNB1Q9BVA0 655 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 GPR35Q9HC97 309 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 CA10Q9NS85 328 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 RCE1Q9Y256 329 aa12.47□□□□□ -0.41
VMP1-206ENST00000587945 CUBNO60494 3623 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 CR1P17927 2039 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 LRRN3E7EW58 273 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 OR2T1O43869 369 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 FZD7O75084 574 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 IGLV1-44P01699 117 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 CRYAAP02489 173 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms