RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 DEF8Q6ZN54 512 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 FKBP9P1Q75LS8 142 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 GTF2IRD2Q86UP8 949 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 TMEM158Q8WZ71 300 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 ROBO4Q8WZ75 1007 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 SLC38A4Q969I6 547 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 ZHX1-C8orf76Q96EF9 292 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 DNAJA3Q96EY1 480 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 PLPPR2Q96GM1 343 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 POTEKPQ9BYX7 375 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 PROCRQ9UNN8 238 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 SAMD4AQ9UPU9 718 aaKnown RBP13.89□□□□□ -0.19
NCLN-203ENST00000587740 LAMP3Q9UQV4 416 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 SNX13Q9Y5W8 968 aa13.89□□□□□ -0.19
NCLN-203ENST00000587740 A0A0B4J2E0 115 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 A0A1B0GX12 115 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 CD5LO43866 347 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 ATP5HO75947 161 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 OR2B6P58173 313 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 BNIP1Q12981 228 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 ZNF239Q16600 458 aaKnown RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 C6orf89Q6UWU4 347 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 VTCN1Q7Z7D3 282 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 LILRB1Q8NHL6 650 aaPredicted RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 STK35Q8TDR2 534 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 ADAMTS16Q8TE57 1224 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 GEMIN6Q8WXD5 167 aaKnown RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 AKAP1Q92667 903 aaKnown RBP eCLIP13.88□□□□□ -0.194e-13■■■■■ 59.6
NCLN-203ENST00000587740 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 THTPAQ9BU02 230 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 DCAF13Q9NV06 445 aaKnown RBP13.88□□□□□ -0.19
NCLN-203ENST00000587740 TRAPPC4Q9Y296 219 aa13.88□□□□□ -0.19
NCLN-203ENST00000587740 A0A087WUJ7 227 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 IGHV3-15A0A0B4J1V0 119 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 ARPC2O15144 300 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 TLX2O43763 284 aaPredicted RBP13.87□□□□□ -0.19
NCLN-203ENST00000587740 PLGP00747 810 aaPredicted RBP13.87□□□□□ -0.19
NCLN-203ENST00000587740 IFNA2P01563 188 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 IFNW1P05000 195 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 SOD3P08294 240 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 IFNA8P32881 189 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 IDUAP35475 653 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 RASSF2P50749 326 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 CDH12P55289 794 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 TAS2R41P59536 307 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 RPS4XP62701 263 aaKnown RBP13.87□□□□□ -0.19
NCLN-203ENST00000587740 C1orf140Q5VVS0 124 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 FCRLAQ7L513 359 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 FAM214BQ7L5A3 538 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 SLC43A2Q8N370 569 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 HSH2DQ96JZ2 352 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 BTBD10Q9BSF8 475 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 TAPBPLQ9BX59 468 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 POLR2J2Q9GZM3 115 aaKnown RBP13.87□□□□□ -0.19
NCLN-203ENST00000587740 POLR2J3Q9H1A7 115 aaKnown RBP13.87□□□□□ -0.19
NCLN-203ENST00000587740 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 YAE1D1Q9NRH1 226 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 PLSCR4Q9NRQ2 329 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 ANK2Q01484 3957 aa13.87□□□□□ -0.19
NCLN-203ENST00000587740 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 PHF1O43189 567 aaPredicted RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 DNPH1O43598 174 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 CHP2O43745 196 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 PDE5AO76074 875 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 PRKD3O94806 890 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 AHSA1O95433 338 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 STAMBPO95630 424 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 F12P00748 615 aaPredicted RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 GPIP06744 558 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 IMPDH2P12268 514 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 PPP3CBP16298 524 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 SLC35A1P78382 337 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 TRIM25Q14258 630 aaKnown RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 RNPS1Q15287 305 aaKnown RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 C5orf46Q6UWT4 87 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 DNM1P46Q6ZS02 220 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 WFDC8Q8IUA0 241 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 RNF128Q8TEB7 428 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 SLC7A6OSQ96CW6 309 aaPredicted RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 SLC41A3Q96GZ6 507 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 NAA11Q9BSU3 229 aaPredicted RBP13.86□□□□□ -0.19
NCLN-203ENST00000587740 AMBRA1Q9C0C7 1298 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 GLRX2Q9NS18 164 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 ACTR3BQ9P1U1 418 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 SLC7A7Q9UM01 511 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 CLEC4AQ9UMR7 237 aa13.86□□□□□ -0.19
NCLN-203ENST00000587740 SMAD9O15198 467 aaKnown RBP13.85□□□□□ -0.19
NCLN-203ENST00000587740 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
NCLN-203ENST00000587740 NPIPB7O75200 414 aa13.85□□□□□ -0.19
NCLN-203ENST00000587740 OR5F1O95221 314 aa13.85□□□□□ -0.19
NCLN-203ENST00000587740 TP53P04637 393 aaPredicted RBP13.85□□□□□ -0.19
NCLN-203ENST00000587740 DANCRP0C864 163 aa13.85□□□□□ -0.19
NCLN-203ENST00000587740 ACVR1BP36896 505 aa13.85□□□□□ -0.19
NCLN-203ENST00000587740 RPS5P46782 204 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms