RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 BLVRAP53004 296 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MLLT10P55197 1068 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CDH15P55291 814 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 DLX5P56178 289 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SOX8P57073 446 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 OR2B6P58173 313 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 GPR85P60893 370 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 RPS3AP61247 264 aaKnown RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC35A2P78381 396 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ST3GAL4Q11206 333 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MED22Q15528 200 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 DEFB109BQ30KR1 87 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TIMM50Q3ZCQ8 353 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF766Q5HY98 468 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC35D3Q5M8T2 416 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC25A30Q5SVS4 291 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC35F1Q5T1Q4 408 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ATP1A1-AS1Q5TC04 95 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TMEM225Q6GV28 225 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC25A25Q6KCM7 469 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 NIPAL3Q6P499 406 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PLBD1Q6P4A8 553 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 LEG1Q6P5S2 330 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 H1FNTQ75WM6 255 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF367Q7RTV3 350 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SLC46A3Q7Z3Q1 461 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 FAM220AQ7Z4H9 259 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 IGFN1Q86VF2 1251 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ADGRG3Q86Y34 549 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CCDC103Q8IW40 242 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZADH2Q8N4Q0 377 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MEIOBQ8N635 442 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 POMGNT2Q8NAT1 580 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ADPRHL1Q8NDY3 354 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SDR9C7Q8NEX9 313 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PROKR2Q8NFJ6 384 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 OR2M7Q8NG81 312 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 OR52E2Q8NGJ4 325 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 OR2T4Q8NH00 348 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 OR4Q3Q8NH05 313 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF417Q8TAU3 575 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 FNDC8Q8TC99 324 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 APH1BQ8WW43 257 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TAAR8Q969N4 342 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 RNFT2Q96EX2 444 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF582Q96NG8 517 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 MOGAT1Q96PD6 335 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TNFRSF13CQ96RJ3 184 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF587Q96SQ5 575 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 GPA33Q99795 319 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 SCNM1Q9BWG6 230 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 RTN4RQ9BZR6 473 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 LDAHQ9H6V9 325 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TMEM185BQ9H7F4 350 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 INPP5EQ9NRR6 644 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PAQR5Q9NXK6 330 aaPredicted RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 QPCTLQ9NXS2 382 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 ZNF226Q9NYT6 803 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 TNFRSF10DQ9UBN6 386 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 PSORS1C1Q9UIG5 152 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 FBXL2Q9UKC9 423 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MOKQ9UQ07 419 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 B3GALT5Q9Y2C3 310 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 MRPS18CQ9Y3D5 142 aaKnown RBP5.59□□□□□ -1.51
LIG3-206ENST00000586058 PCDHGB5Q9Y5G0 923 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 NOX1Q9Y5S8 564 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 IER3IP1Q9Y5U9 82 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 COMMD3-BMI1R4GMX3 469 aa5.59□□□□□ -1.51
LIG3-206ENST00000586058 CACNA1HO95180 2353 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MUC3AQ02505 3323 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 TRAV17A0A0B4J275 112 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 A0A1W2PNV4 684 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 LRRN3E7EW58 273 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MKRN2OSH3BPM6 223 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MASP2O00187 686 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 EIF1AYO14602 144 aaKnown RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 PHYHO14832 338 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 TFECO14948 347 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 PTP4A3O75365 173 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SYNGR4O95473 234 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 NTN1O95631 604 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 BCL10O95999 233 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 PLGP00747 810 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 IGHMP01871 453 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 HLA-DQA2P01906 255 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MT-ND2P03891 347 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 F13BP05160 661 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 SP1P08047 785 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 IGFBP1P08833 259 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 ZNF43P17038 809 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 GABRB1P18505 474 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 FUT4P22083 530 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 CRABP1P29762 137 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 HTR1FP30939 366 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 ACVR1BP36896 505 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 GUCA1AP43080 201 aaPredicted RBP5.58□□□□□ -1.52
LIG3-206ENST00000586058 DIO1P49895 249 aa5.58□□□□□ -1.52
LIG3-206ENST00000586058 MEOX1P50221 254 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms