RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ADH6P28332 368 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 EIF1P41567 113 aaKnown RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 CASP3P42574 277 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 CLK1P49759 484 aaKnown RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZNF41P51814 821 aaPredicted RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 TUBA1BP68363 451 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 EGR4Q05215 589 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.9
LIG3-203ENST00000585370 SLC35D3Q5M8T2 416 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZNF362Q5T0B9 420 aaPredicted RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 FAM69AQ5T7M9 428 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 SLC22A10Q63ZE4 541 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 NIPAL3Q6P499 406 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PLBD1Q6P4A8 553 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 C16orf47Q6ZP98 133 aaPredicted RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 TUBA1AQ71U36 451 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 EGFL6Q8IUX8 553 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 TMEM156Q8N614 296 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PTP4A1Q93096 173 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 DDIT4LQ96D03 193 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 MRPL48Q96GC5 212 aaKnown RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 MESP1Q9BRJ9 268 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 TAPBPLQ9BX59 468 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ANGPTL4Q9BY76 406 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ENKD1Q9H0I2 346 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 CDCP1Q9H5V8 836 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 TNFRSF10DQ9UBN6 386 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 IL20RAQ9UHF4 553 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 GPR52Q9Y2T5 361 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PCDHGB7Q9Y5F8 929 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 CORINQ9Y5Q5 1042 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 SPIN1Q9Y657 262 aaPredicted RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 PRRC2CQ9Y520 2896 aaKnown RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 HEATR5AQ86XA9 2040 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 LOC101059948A0A1B0GTJ6 334 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TMEM72A0PK05 275 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 ZNF891A8MT65 544 aaPredicted RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 BLOC1S5-TXNDC5H3BN57 136 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 M0R082 166 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SNX4O95219 450 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 ATE1O95260 518 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SLC2A10O95528 541 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 BCL10O95999 233 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 IGHA1P01876 353 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SCG5P05408 212 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 PTNP21246 168 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 UQCRC1P31930 480 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 OTX2P32243 289 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 UGT2B10P36537 528 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 PTGDSP41222 190 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SOX3P41225 446 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 RGS6P49758 472 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SLC25A1P53007 311 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 MLLT10P55197 1068 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 WNT4P56705 351 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TLE1Q04724 770 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 ACSM1Q08AH1 577 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 MLLT11Q13015 90 aaPredicted RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 MED22Q15528 200 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TOMM34Q15785 309 aaPredicted RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 SGCBQ16585 318 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 CTF1Q16619 201 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 ALG10Q5BKT4 473 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SLC35F1Q5T1Q4 408 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 C1orf140Q5VVS0 124 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TMPRSS11AQ6ZMR5 421 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 LINC00299Q6ZSB3 139 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SLC16A12Q6ZSM3 486 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 NANOGNBQ7Z5D8 188 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 BCDIN3DQ7Z5W3 292 aaKnown RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 ACBD7Q8N6N7 88 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 LRRC17Q8N6Y2 441 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 LRRC75AQ8NAA5 344 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 FAM98AQ8NCA5 519 aaKnown RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 SLC37A3Q8NCC5 494 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 OR10G3Q8NGC4 313 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 OR5J2Q8NH18 312 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 OR52N1Q8NH53 320 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 MFSD8Q8NHS3 518 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 PAQR8Q8TEZ7 354 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TAAR8Q969N4 342 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 NTNG2Q96CW9 530 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 KTI12Q96EK9 354 aaPredicted RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 SNX18Q96RF0 628 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TEAD3Q99594 435 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 ASPNQ9BXN1 380 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 SIAEQ9HAT2 523 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 TIMMDC1Q9NPL8 285 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 HPF1Q9NWY4 346 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 MED11Q9P086 117 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 MOKQ9UQ07 419 aa9.4□□□□□ -0.9
LIG3-203ENST00000585370 LSM2Q9Y333 95 aaKnown RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
LIG3-203ENST00000585370 UTP20O75691 2785 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 MCIDASD6RGH6 385 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms