RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 SLC22A25Q6T423 547 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 SEZ6L2Q6UXD5 910 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 H1FNTQ75WM6 255 aaPredicted RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 OR10A6Q8NH74 314 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 LILRB1Q8NHL6 650 aaPredicted RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 RASSF5Q8WWW0 418 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 TAAR8Q969N4 342 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 OXGR1Q96P68 337 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 MCHR1Q99705 422 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 ECSITQ9BQ95 431 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 PTDSS2Q9BVG9 487 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 ZNF701Q9NV72 531 aaPredicted RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 NPAP1Q9NZP6 1156 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 B3GALT5Q9Y2C3 310 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 A0A087WUJ7 227 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 A0A0B4J2E0 115 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 A0A1B0GX12 115 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 M0R082 166 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 FMO6PO60774 539 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 SLC43A1O75387 559 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 LGI1O95970 557 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 NPPAP01160 153 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 NQO1P15559 274 aaKnown RBP10.87□□□□□ -0.67
SS18-225ENST00000585121 CD40P25942 277 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 GRPRP30550 384 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 PCGF2P35227 344 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 FOXG1P55316 489 aaPredicted RBP10.87□□□□□ -0.67
SS18-225ENST00000585121 CLDN17P56750 224 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 COQ5Q5HYK3 327 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 HMBOX1Q6NT76 420 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 COMTD1Q86VU5 262 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 EPHX4Q8IUS5 362 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 KDM8Q8N371 416 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 C10orf53Q8N6V4 93 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 PCYOX1LQ8NBM8 494 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 OR6S1Q8NH40 331 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 ZNF417Q8TAU3 575 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 NEUROG1Q92886 237 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
SS18-225ENST00000585121 C1QTNF6Q9BXI9 259 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 ASPNQ9BXN1 380 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 AMBRA1Q9C0C7 1298 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 FKRPQ9H9S5 495 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 GID8Q9NWU2 228 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 RCE1Q9Y256 329 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 CORINQ9Y5Q5 1042 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 USF3Q68DE3 2245 aa10.87□□□□□ -0.67
SS18-225ENST00000585121 CADP27708 2225 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 SHISA9B4DS77 424 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 MRASO14807 208 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 OPN1SWP03999 348 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 SOD3P08294 240 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 DANCRP0C864 163 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 SELENOPP49908 381 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 CDH12P55289 794 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 UBE2NP61088 152 aaKnown RBP10.86□□□□□ -0.67
SS18-225ENST00000585121 SF3A3Q12874 501 aaKnown RBP eCLIP10.86□□□□□ -0.674e-6■■■■□ 22.2
SS18-225ENST00000585121 KLF10Q13118 480 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 DUSP7Q16829 419 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 VMACQ2NL98 169 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 AGAP6Q5VW22 663 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 NANOGP8Q6NSW7 305 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 ZNF613Q6PF04 617 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 LSRQ86X29 649 aaPredicted RBP10.86□□□□□ -0.67
SS18-225ENST00000585121 WDR31Q8NA23 367 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 ADPRHL1Q8NDY3 354 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 OR8J3Q8NGG0 315 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 LRRC58Q96CX6 371 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 RSPO3Q9BXY4 272 aaPredicted RBP10.86□□□□□ -0.67
SS18-225ENST00000585121 LINC00470Q9BZP3 86 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 GSX1Q9H4S2 264 aaPredicted RBP10.86□□□□□ -0.67
SS18-225ENST00000585121 NANOGQ9H9S0 305 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 OBP2BQ9NPH6 170 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 KLHL14Q9P2G3 628 aa10.86□□□□□ -0.67
SS18-225ENST00000585121 IGKV1D-42A0A075B6H8 117 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 LOC102725191A0A1B0GVB3 256 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 H7C1Q1 480 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 M0R3H8 397 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 FBP2O00757 339 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 SNX3O60493 162 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 FZD7O75084 574 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 IFNA14P01570 189 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 CBLP22681 906 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 SH3BGRP55822 239 aaPredicted RBP10.85□□□□□ -0.67
SS18-225ENST00000585121 PMS2P3Q13401 168 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 ETFDHQ16134 617 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 NRF1Q16656 503 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 REP15Q6BDI9 236 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 ERICH5Q6P6B1 374 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 CLEC9AQ6UXN8 241 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 UEVLDQ8IX04 471 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 GPR137CQ8N3F9 429 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms