RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SH2D5Q6ZV89 423 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ISCA2Q86U28 154 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CDR2LQ86X02 465 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZDHHC21Q8IVQ6 265 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 MREGQ8N565 214 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 C12orf29Q8N999 325 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52B4Q8NGK2 314 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR6S1Q8NH40 331 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FBXO25Q8TCJ0 367 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SAP25Q8TEE9 199 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF473Q8WTR7 871 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PIH1D2Q8WWB5 315 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 WDR34Q96EX3 536 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CNDP1Q96KN2 507 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CYP2S1Q96SQ9 504 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC3Q9BQI4 270 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ERVK-6Q9BXR3 956 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FGFBP2Q9BYJ0 223 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ARRDC1-AS1Q9H2J1 176 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 Q9N2K0 584 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 A4GALTQ9NPC4 353 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL40Q9NQ50 206 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DDX28Q9NUL7 540 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GIN1Q9NXP7 522 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TAS2R16Q9NYV7 291 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 APOBEC3BQ9UH17 382 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DCDC2Q9UHG0 476 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PHF11Q9UIL8 331 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NDRG2Q9UN36 371 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RPH3ALQ9UNE2 315 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FOXA2Q9Y261 457 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CACNA1HO95180 2353 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM172BPA6NC97 362 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ANKDD1BA6NHY2 528 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DFFAO00273 331 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TULP2O00295 520 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NTN3O00634 580 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RGS14O43566 566 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZBTB11O95625 1053 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RHOXF2BP0C7M4 288 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP1B2P14415 290 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DEKP35659 375 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LEPRP48357 1165 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ARCN1P48444 511 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PSMD4P55036 377 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DSCR9P59020 149 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RELQ04864 619 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RGS1Q08116 209 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CNTN1Q12860 1018 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IL24Q13007 206 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 EXOSC2Q13868 293 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM53BQ14153 422 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GNA13Q14344 377 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RBM39Q14498 530 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DCAF12Q5T6F0 453 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 C1orf189Q5VU69 101 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TIGD3Q6B0B8 471 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 BHLHB9Q6PI77 547 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DHRS11Q6UWP2 260 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LEKR1Q6ZMV7 388 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PIWIL4Q7Z3Z4 852 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM135Q86UB9 458 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CDH26Q8IXH8 852 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC22A15Q8IZD6 547 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 BCORP1Q8N888 145 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LRTM2Q8N967 370 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NPEPL1Q8NDH3 523 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 C17orf47Q8NEP4 570 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4L1Q8NH43 312 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR5R1Q8NH85 324 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ING5Q8WYH8 240 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZFP3Q96NJ6 502 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINB12Q96P63 405 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PLA2G2FQ9BZM2 168 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 POLR2J2Q9GZM3 115 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 VN1R1Q9GZP7 353 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 POLR2J3Q9H1A7 115 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRN3Q9H3W5 708 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TUBB1Q9H4B7 451 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZDHHC6Q9H6R6 413 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 KAT8Q9H7Z6 458 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 UGT1A8Q9HAW9 530 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZBTB20Q9HC78 741 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IL17CQ9P0M4 197 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PILRAQ9UKJ1 303 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PSME2Q9UL46 239 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 COPS3Q9UNS2 423 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NAALAD2Q9Y3Q0 740 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 WDR45Q9Y484 360 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NOTCH4Q99466 2003 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DOCK8Q8NF50 2099 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 IGLV5-37A0A075B6J1 123 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A0J9YY10 115 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 GMNCA6NCL1 334 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 WASHC1A8K0Z3 465 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 IDSB3KWA1 339 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 INAFM1C9JVW0 142 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 M0R3G1 203 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 SMIM24O75264 130 aa1.69□□□□□ -2.14
SMCHD1-211ENST00000584897 MYO1DO94832 1006 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms