RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SLC35F3Q8IY50 421 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 LGALS14Q8TCE9 139 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 HSD17B8Q92506 261 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 OMA1Q96E52 524 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 NUDT9Q9BW91 350 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 DEFB126Q9BYW3 111 aa10.34□□□□□ -0.75
TOP3A-217ENST00000584582 PLEKHB1Q9UF11 243 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-217ENST00000584582 ROS1P08922 2347 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 DSPPQ9NZW4 1301 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 A0A087WV62 115 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 MBTPS2O43462 519 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 NKX2-2O95096 273 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 NGFRP08138 427 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 SYPP08247 313 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 PGCP20142 388 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 PITPNBP48739 271 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 EMP2P54851 167 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 POU3F1Q03052 451 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-217ENST00000584582 PRAMEF8Q5VWM4 474 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 PRAMEF7Q5VXH5 474 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 LIPNQ5VXI9 398 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TOR1AIP2Q8NFQ8 470 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 OR5H6Q8NGV6 325 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 OR5AK2Q8NH90 309 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 FAM46BQ96A09 425 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 SRRQ9GZT4 340 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 FARSAQ9Y285 508 aaKnown RBP10.33□□□□□ -0.76
TOP3A-217ENST00000584582 A0A0B4J2E0 115 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TRBV11-1A0A0K0K1C0 115 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 A0A1B0GX12 115 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 ALOX12BO75342 701 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 EIF4EP06730 217 aaKnown RBP10.33□□□□□ -0.76
TOP3A-217ENST00000584582 POU2F2P09086 479 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 SPI1P17947 270 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TAS2R43P59537 309 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 GALEQ14376 348 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TMEM69Q5SWH9 247 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 YOD1Q5VVQ6 348 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-217ENST00000584582 MS4A15Q8N5U1 240 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 OR2T4Q8NH00 348 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 CCDC74AQ96AQ1 378 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 GPER1Q99527 375 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 LPAR4Q99677 370 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 MIXL1Q9H2W2 232 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 TAS2R10Q9NYW0 307 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 SIT1Q9Y3P8 196 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 USP34Q70CQ2 3546 aa10.33□□□□□ -0.76
TOP3A-217ENST00000584582 CT45A8P0DMV1 189 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 CT45A9P0DMV2 189 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 LIPCP11150 499 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 SLC6A9P48067 706 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 HSD17B7P56937 341 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 CT45A2Q5DJT8 189 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 TMEM201Q5SNT2 666 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 GARNL3Q5VVW2 1013 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 RBM12BQ8IXT5 1001 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 OR4K17Q8NGC6 315 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 OR4D9Q8NGE8 314 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 STT3BQ8TCJ2 826 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 NPRL2Q8WTW4 380 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 GINS4Q9BRT9 223 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 ANKRD19PQ9H560 264 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 FGF20Q9NP95 211 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 NCDNQ9UBB6 729 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 EIF3KQ9UBQ5 218 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 PCOLCE2Q9UKZ9 415 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 RARRES3Q9UL19 164 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 SHISA3A0PJX4 238 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 SCRG1O75711 98 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 SLC2A1P11166 492 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 RPL18Q07020 188 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 ZNF79Q15937 498 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 SCGB2B2Q4G0G5 96 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 HEPHL1Q6MZM0 1159 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 NXPE2Q96DL1 559 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 TM4SF19Q96DZ7 209 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 CMKLR1Q99788 373 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 A6NCN8 305 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 NME1P15531 152 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 KIR2DL3P43628 341 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 CCR5P51681 352 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 TLE3Q04726 772 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 PAPD4Q6PIY7 484 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 OR52N1Q8NH53 320 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 BRIX1Q8TDN6 353 aaKnown RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 C3orf49Q96BT1 292 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 ZNF486Q96H40 463 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-217ENST00000584582 VSTM2LQ96N03 204 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 WDR76Q9H967 626 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 ELOVL3Q9HB03 270 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 MCCC2Q9HCC0 563 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 MED17Q9NVC6 651 aa10.32□□□□□ -0.76
TOP3A-217ENST00000584582 MED29Q9NX70 200 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms