RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 KBTBD8Q8NFY9 601 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 LILRB1Q8NHL6 650 aaPredicted RBP17.95■□□□□ 0.46
SS18-224ENST00000584083 RASSF5Q8WWW0 418 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 NEUROG1Q92886 237 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 NPAP1Q9NZP6 1156 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 B3GALT5Q9Y2C3 310 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 SLC25A15Q9Y619 301 aa17.95■□□□□ 0.46
SS18-224ENST00000584083 CCDC22O60826 627 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 NQO1P15559 274 aaKnown RBP17.94■□□□□ 0.46
SS18-224ENST00000584083 LGALS3BPQ08380 585 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 MFSD13AQ14CX5 517 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 NPTX1Q15818 432 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 ENTPD8Q5MY95 495 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 ERICH5Q6P6B1 374 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 TMEM108Q6UXF1 575 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 RBM45Q8IUH3 476 aaKnown RBP17.94■□□□□ 0.46
SS18-224ENST00000584083 OR4D11Q8NGI4 311 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 FBXW5Q969U6 566 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 RCN3Q96D15 328 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 TMEM43Q9BTV4 400 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 C1QTNF6Q9BXI9 259 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 ASPNQ9BXN1 380 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 USP22Q9UPT9 525 aa17.94■□□□□ 0.46
SS18-224ENST00000584083 OR6C65A6NJZ3 312 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 ZNF587BE7ETH6 402 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 M0R1B8 84 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 ABCD4O14678 606 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 ZNF672Q499Z4 452 aaPredicted RBP17.93■□□□□ 0.46
SS18-224ENST00000584083 Q5PR19 223 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 KLHL24Q6TFL4 600 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 C17orf78Q8N4C9 275 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 WDR31Q8NA23 367 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 OR6S1Q8NH40 331 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 PROX1Q92786 737 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 ZNF583Q96ND8 569 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 AMBRA1Q9C0C7 1298 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 CXorf56Q9H5V9 222 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 SLC17A5Q9NRA2 495 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 LAMP3Q9UQV4 416 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 AMDHD2Q9Y303 409 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 CORINQ9Y5Q5 1042 aa17.93■□□□□ 0.46
SS18-224ENST00000584083 USF3Q68DE3 2245 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 ACANP16112 2415 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 CHP2O43745 196 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 FZD7O75084 574 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 IFNA14P01570 189 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 BGLAPP02818 100 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 CRYBA2P53672 197 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 PMS2P3Q13401 168 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 VEZF1Q14119 521 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 KRTAP1-3Q8IUG1 177 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
SS18-224ENST00000584083 RP9Q8TA86 221 aaKnown RBP17.92■□□□□ 0.46
SS18-224ENST00000584083 ADAMTS16Q8TE57 1224 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 SMAP2Q8WU79 429 aaPredicted RBP17.92■□□□□ 0.46
SS18-224ENST00000584083 MOGAT1Q96PD6 335 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 ALKBH3Q96Q83 286 aaPredicted RBP17.92■□□□□ 0.46
SS18-224ENST00000584083 ELAC2Q9BQ52 826 aaKnown RBP17.92■□□□□ 0.46
SS18-224ENST00000584083 B3GAT1Q9P2W7 334 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 BAG5Q9UL15 447 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 RCE1Q9Y256 329 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 SH3GLB1Q9Y371 365 aa17.92■□□□□ 0.46
SS18-224ENST00000584083 FLNAP21333 2647 aaKnown RBP17.91■□□□□ 0.46
SS18-224ENST00000584083 TRAPPC13A5PLN9 417 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 SLC43A1O75387 559 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 UPK3AO75631 287 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 COX4I1P13073 169 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 PTAFRP25105 342 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 PTH2RP49190 550 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 PRPS1P60891 318 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 RPS4XP62701 263 aaKnown RBP17.91■□□□□ 0.46
SS18-224ENST00000584083 LTBQ06643 244 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 HMBOX1Q6NT76 420 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 TTC33Q6PID6 262 aaPredicted RBP17.91■□□□□ 0.46
SS18-224ENST00000584083 UEVLDQ8IX04 471 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 SCAIQ8N9R8 606 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 ADPRHL1Q8NDY3 354 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 OR2T12Q8NG77 320 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 IGFBPL1Q8WX77 278 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 RADILQ96JH8 1075 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 GSX2Q9BZM3 304 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 LINC00470Q9BZP3 86 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 CISD1Q9NZ45 108 aaKnown RBP17.91■□□□□ 0.46
SS18-224ENST00000584083 POU2F3Q9UKI9 436 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 SLC7A7Q9UM01 511 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 MGAT4BQ9UQ53 548 aa17.91■□□□□ 0.46
SS18-224ENST00000584083 MAGED1Q9Y5V3 778 aaPredicted RBP17.91■□□□□ 0.46
SS18-224ENST00000584083 LOC102725191A0A1B0GVB3 256 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 FAM220BPB1ANY3 271 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 SHISA9B4DS77 424 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 LRRN3E7EW58 273 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 MS4A18H0YCH9 400 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 AKAP8O43823 692 aaKnown RBP17.9■□□□□ 0.46
SS18-224ENST00000584083 TMCC2O75069 709 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 WNT11O96014 354 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 CD40P25942 277 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 CDH11P55287 796 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 ROR2Q01974 943 aaKnown RBP17.9■□□□□ 0.46
SS18-224ENST00000584083 MS4A18Q3C1V0 323 aa17.9■□□□□ 0.46
SS18-224ENST00000584083 HIKESHIQ53FT3 197 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms