RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NUP37Q8NFH4 326 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 OR1K1Q8NGR3 316 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 C10orf82Q8WW14 230 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 PMM1Q92871 262 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 BOD1Q96IK1 185 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 TEX37Q96LM6 180 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 ANKRD27Q96NW4 1050 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 JMJD8Q96S16 334 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 ZNF350Q9GZX5 532 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 RABEP2Q9H5N1 569 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 ZNF442Q9H7R0 627 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 MRGBPQ9NV56 204 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 PCDHGB4Q9UN71 923 aa10.65□□□□□ -0.7
TOP3A-215ENST00000583328 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 TMEM129A0AVI4 362 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 TMEM72A0PK05 275 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF587BE7ETH6 402 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 NR5A2O00482 541 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 RNASET2O00584 256 aaKnown RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 IL6P05231 212 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ADRA2AP08913 450 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 NCF2P19878 526 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 DRD4P21917 467 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 IL12AP29459 219 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 HTR3AP46098 478 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 LIMS1P48059 325 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 KHKP50053 298 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 HILS1P60008 231 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 HGFACQ04756 655 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 SF3A3Q12874 501 aaKnown RBP eCLIP10.64□□□□□ -0.716e-6■□□□□ 10.9
TOP3A-215ENST00000583328 C3orf36Q3SXR2 165 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 OTUD3Q5T2D3 398 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 FAHD2BQ6P2I3 314 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 PAQR6Q6TCH4 344 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 USP43Q70EL4 1123 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ZIC4Q8N9L1 334 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 FAM71CQ8NEG0 241 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 VPS37AQ8NEZ2 397 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 OR9K2Q8NGE7 335 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 OR9I1Q8NGQ6 314 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 FAHD2AQ96GK7 314 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF385AQ96PM9 386 aaKnown RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ELAC2Q9BQ52 826 aaKnown RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 FAM107BQ9H098 131 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 TPK1Q9H3S4 243 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 SERHL2Q9H4I8 314 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF385DQ9H6B1 395 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 SEC61A2Q9H9S3 476 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 CRNNQ9UBG3 495 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-215ENST00000583328 USP22Q9UPT9 525 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 TMED7Q9Y3B3 224 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
TOP3A-215ENST00000583328 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 A0A096LPE4 126 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 ARPC4-TTLL3A0A0A6YYG9 625 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 PRSS51A0A1B0GVH4 220 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 A0A1W2PPZ6 126 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 OR6C65A6NJZ3 312 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 ZNF208O43345 1280 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 SHOX2O60902 331 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 SCN2BO60939 215 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 AKR7A3O95154 331 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 MSMBP08118 114 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 EPHA1P21709 976 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 POLR2HP52434 150 aaKnown RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 POLR2JP52435 117 aaKnown RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 HBA1P69905 142 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 KCNJ10P78508 379 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 DEFA6Q01524 100 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 LRRC74AQ0VAA2 488 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 AWAT1Q58HT5 328 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 PRR31Q5SQ13 230 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 ATAD3BQ5T9A4 648 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 MSANTD1Q6ZTZ1 278 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 GPAT4Q86UL3 456 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 CDK20Q8IZL9 346 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 CLEC4FQ8N1N0 589 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 TMEM99Q8N816 258 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 CLDND2Q8NHS1 167 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 XAGE5Q8WWM1 108 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 SLC35G5Q96KT7 338 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 LRRC37BQ96QE4 947 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 OR52E6Q96RD3 313 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 SF3B5Q9BWJ5 86 aaKnown RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 MOV10Q9HCE1 1003 aaKnown RBP10.63□□□□□ -0.71
TOP3A-215ENST00000583328 BTNL2Q9UIR0 455 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 OSGIN1Q9UJX0 560 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 WDR45Q9Y484 360 aa10.63□□□□□ -0.71
TOP3A-215ENST00000583328 ZC3H12DA2A288 527 aaKnown RBP10.62□□□□□ -0.71
TOP3A-215ENST00000583328 CLDN24A6NM45 220 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 TMPRSS2O15393 492 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 SNX3O60493 162 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 IGLV1-44P01699 117 aa10.62□□□□□ -0.71
TOP3A-215ENST00000583328 GPIP06744 558 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms