RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 NKX2-6A6NCS4 301 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 FZD7O75084 574 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 ENTPD5O75356 428 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 OR6A2O95222 327 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 HPRP00739 348 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 ASAH2BP0C7U1 165 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 KIR2DL2P43627 348 aaPredicted RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 PRKCDQ05655 676 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 PUDPQ08623 228 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 C1DQ13901 141 aaKnown RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 PAPD5Q8NDF8 572 aaKnown RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 ADPRHL1Q8NDY3 354 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 UCK2Q9BZX2 261 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 OPN3Q9H1Y3 402 aaPredicted RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 B3GAT1Q9P2W7 334 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
GGA3-216ENST00000583282 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
GGA3-216ENST00000583282 A1L4Q6 167 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 BLOC1S5-TXNDC5H3BN57 136 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 PLPP3O14495 311 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 CDC42EP2O14613 210 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 RNF13O43567 381 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 DEAF1O75398 565 aaPredicted RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 KRT36O76013 467 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 HOXB6P17509 224 aaKnown RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 OPRM1P35372 400 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 AQP2P41181 271 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 OMPP47874 163 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 LIMS1P48059 325 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 SLC16A1P53985 500 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 RPL18Q07020 188 aaKnown RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 TOP3AQ13472 1001 aaPredicted RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 MELKQ14680 651 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 SLC17A1Q14916 467 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 PGBD2Q6P3X8 592 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 ZNF771Q7L3S4 317 aaPredicted RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 IGFN1Q86VF2 1251 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 CDK20Q8IZL9 346 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 RNF113BQ8IZP6 322 aaKnown RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 HS3ST5Q8IZT8 346 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 AQP11Q8NBQ7 271 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 OR10G2Q8NGC3 310 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 OR6K3Q8NGY3 331 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 OR51A7Q8NH64 312 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 MOSPD2Q8NHP6 518 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 FANK1Q8TC84 345 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 LRTOMTQ8WZ04 291 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 ZNF385AQ96PM9 386 aaKnown RBP12.46□□□□□ -0.41
GGA3-216ENST00000583282 BCO1Q9HAY6 547 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 DNAJB9Q9UBS3 223 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.41
GGA3-216ENST00000583282 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 IGKV3D-15A0A087WSY6 115 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 CLOCKO15516 846 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 IGF2P01344 180 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 IGHV3-9P01782 118 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 F13BP05160 661 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 CRHP06850 196 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 YES1P07947 543 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 FCGR1AP12314 374 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 POU2F1P14859 743 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 ZNF43P17038 809 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 EDNRAP25101 427 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 FASP25445 335 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 CLDN17P56750 224 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 ATP6AP1Q15904 470 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 NIPAL3Q6P499 406 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 GALNT5Q7Z7M9 940 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 TMEM179BQ7Z7N9 219 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 OAFQ86UD1 273 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 STMN2Q93045 179 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 OXGR1Q96P68 337 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 GPA33Q99795 319 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 TACO1Q9BSH4 297 aaKnown RBP12.45□□□□□ -0.42
GGA3-216ENST00000583282 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
GGA3-216ENST00000583282 SEMA6AQ9H2E6 1030 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 MED29Q9NX70 200 aa12.45□□□□□ -0.42
GGA3-216ENST00000583282 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms