RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	BANP	Q8N9N5	519 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF383	Q8NA42	475 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CLEC1A	Q8NC01	280 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TTL	Q8NG68	377 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	OR2L3	Q8NG85	312 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	OR4E2	Q8NGC2	313 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	RAB3IL1	Q8TBN0	382 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NAT14	Q8WUY8	206 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	KCTD4	Q8WVF5	259 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SKA2	Q8WVK7	121 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SLC13A3	Q8WWT9	602 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SLC5A11	Q8WWX8	675 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NUP205	Q92621	2012 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	UBE2E3	Q969T4	207 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TLCD1	Q96CP7	247 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NXPE2	Q96DL1	559 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	L3HYPDH	Q96EM0	354 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	WBP1	Q96G27	269 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ATXN7L3B	Q96GX2	97 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ZNF578	Q96N58	590 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	TSSK2	Q96PF2	358 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	C17orf62	Q9BQA9	187 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	EFCAB11	Q9BUY7	163 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NTMT1	Q9BV86	223 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CEP295	Q9C0D2	2601 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	OR2B2	Q9GZK3	357 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	WDR13	Q9H1Z4	485 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	CAB39L	Q9H9S4	337 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FANCE	Q9HB96	536 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FGF21	Q9NSA1	209 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PTBP2	Q9UKA9	531 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PILRA	Q9UKJ1	303 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	IKZF3	Q9UKT9	509 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	ANGPTL2	Q9UKU9	493 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	PLCL2	Q9UPR0	1127 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	FOXA2	Q9Y261	457 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	AP1M2	Q9Y6Q5	423 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453		V9GYY5	206 aa	Predicted RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	EML5	Q05BV3	1969 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SCN8A	Q9UQD0	1980 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NCOR2	Q9Y618	2525 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	USP34	Q70CQ2	3546 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	SPAG17	Q6Q759	2223 aa		2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	MYO18A	Q92614	2054 aa	Known RBP	2.72	□□□□□ -1.97
MSI2-215	ENST00000582453	NUMA1	Q14980	2115 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IGHV4-4	A0A075B6R2	117 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IGHV5-51	A0A0C4DH38	117 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IGKV1-8	A0A0C4DH67	115 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TRBV5-5	A0A0J9YX44	114 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RNF103-CHMP3	A0A140T963	221 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A1W2PNU3	283 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	GSAP	A4D1B5	854 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	GOLGA6L10	A6NI86	522 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453		A8MT66	165 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453		G3V2L1	256 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453		H0YIV9	168 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	E2F3	O00716	465 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	COPE	O14579	308 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	KLF11	O14901	512 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RGS16	O15492	202 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TRMU	O75648	421 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	B3GALNT1	O75752	331 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RAD51D	O75771	328 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PIAS1	O75925	651 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SCEL	O95171	688 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	OTC	P00480	354 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	NGF	P01138	241 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SBK2	P0C263	348 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	C1GALT1C1L	P0DN25	315 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IMPDH1	P20839	514 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	CDH3	P22223	829 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	AHCY	P23526	432 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	MAPK3	P27361	379 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	CCR8	P51685	355 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LUM	P51884	338 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PKNOX1	P55347	436 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	GFER	P55789	205 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	HERVK_113	P63132	956 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SKP1	P63208	163 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	CSNK1G2	P78368	415 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	REEP5	Q00765	189 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	TRAP1	Q12931	704 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LCP2	Q13094	533 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PDE7A	Q13946	482 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	FAM53B	Q14153	422 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	FASTK	Q14296	549 aa	Known RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	C16orf72	Q14CZ0	275 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PDK4	Q16654	411 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ADPRM	Q3LIE5	342 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	KRT71	Q3SY84	523 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PDLIM3	Q53GG5	364 aa	Predicted RBP	2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC35D3	Q5M8T2	416 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	ADAMTSL4-AS1	Q5T5F5	129 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	DCAF12	Q5T6F0	453 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	NKAIN2	Q5VXU1	208 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	LIPJ	Q5W064	366 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	RHBDD2	Q6NTF9	364 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	IRGC	Q6NXR0	463 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	PRMT9	Q6P2P2	845 aa		2.71	□□□□□ -1.98
MSI2-215	ENST00000582453	SIGLEC15	Q6ZMC9	328 aa		2.71	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms