RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 VRK2Q86Y07 508 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 GPR137CQ8N3F9 429 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 RFLNBQ8N5W9 214 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 ARIH2OSQ8N7S6 290 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 TEX37Q96LM6 180 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 SPATA9Q9BWV2 254 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 C20orf27Q9GZN8 174 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 KCNK9Q9NPC2 374 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 RPS6KB2Q9UBS0 482 aa12.66□□□□□ -0.38
CDC42EP4-208ENST00000582303 IGHV4-61A0A0C4DH41 118 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 NPIPB7O75200 414 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SLC22A3O75751 556 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 ALDOCP09972 364 aaKnown RBP12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 DAOP14920 347 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 CBR1P16152 277 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 BGNP21810 368 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 CDKN2CP42773 168 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 P2RY4P51582 365 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 BNIP2Q12982 314 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SCGB2A2Q13296 93 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 PDCD4Q53EL6 469 aaKnown RBP12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 HHATQ5VTY9 493 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SNX32Q86XE0 403 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 EPHX4Q8IUS5 362 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 MREGQ8N565 214 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SLC25A36Q96CQ1 311 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 ITCHQ96J02 903 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 CENPHQ9H3R5 247 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 TPT1P8Q9HAU6 139 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 C12orf10Q9HB07 376 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 DYNLRB1Q9NP97 96 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 THAP1Q9NVV9 213 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 SPEF1Q9Y4P9 236 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 GPR45Q9Y5Y3 372 aa12.65□□□□□ -0.38
CDC42EP4-208ENST00000582303 A0A096LPE4 126 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 A0A1W2PPZ6 126 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 hCG_2039718K7EN88 272 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 AIM2O14862 343 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 TCF21O43680 179 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 STAMBPO95630 424 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 PNMTP11086 282 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 SRP14P37108 136 aaKnown RBP12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 CLDN17P56750 224 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 BST1Q10588 318 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 ZNF311Q5JNZ3 666 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 FAM69AQ5T7M9 428 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 LINC01356Q8N9X3 169 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 OXGR1Q96P68 337 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 USP22Q9UPT9 525 aa12.64□□□□□ -0.39
CDC42EP4-208ENST00000582303 C5orf58C9J3I9 102 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 SDHDO14521 159 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 UPK3AO75631 287 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 TACSTD2P09758 323 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 ETFAP13804 333 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 APEX1P27695 318 aaKnown RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 EPHA3P29320 983 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 IL12AP29459 219 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 RPS5P46782 204 aaKnown RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 CAPZA2P47755 286 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 IL1RL1Q01638 556 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 SPATA21Q7Z572 469 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 SLC38A4Q969I6 547 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 TMEM19Q96HH6 336 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 HEATR1Q9H583 2144 aaKnown RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 DENND2DQ9H6A0 471 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 B3GAT2Q9NPZ5 323 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 SELENONQ9NZV5 590 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 ZIM2Q9NZV7 527 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 TMEFF2Q9UIK5 374 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 CMAHPQ9Y471 501 aa12.63□□□□□ -0.39
CDC42EP4-208ENST00000582303 LOC102725191A0A1B0GVB3 256 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 FTCDNL1E5RQL4 147 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 NR5A2O00482 541 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 ENTPD5O75356 428 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 PRG2P13727 222 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 IFNGR1P15260 489 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 THBS4P35443 961 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 EVX1P49640 407 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 MVDP53602 400 aa12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 ARF1P84077 181 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-208ENST00000582303 NPRL3Q12980 569 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms