RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 DEFB112Q30KQ8 113 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 MROH9Q5TGP6 573 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 PAQR6Q6TCH4 344 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 OLIG3Q7RTU3 272 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 ABHD12BQ7Z5M8 362 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 TREML1Q86YW5 311 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 PARP8Q8N3A8 854 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM99Q8N816 258 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 IL17RDQ8NFM7 739 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 PYROXD1Q8WU10 500 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM234Q8WY98 164 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 FAM120BQ96EK7 910 aaKnown RBP6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 TSPAN32Q96QS1 320 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 KCNA7Q96RP8 456 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 MARCH7Q9H992 704 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 FN3KRPQ9HA64 309 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 MOV10Q9HCE1 1003 aaKnown RBP6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 B3GNT2Q9NY97 397 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 SEC14L4Q9UDX3 406 aa6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 POLR3HQ9Y535 204 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1-217ENST00000580654 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 IGHV1-69-2A0A0G2JMI3 117 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM72A0PK05 275 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 SERTM1A2A2V5 107 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 C17orf100A8MU93 164 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CLDN25C9JDP6 229 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 EIF1BO60739 113 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 FOXH1O75593 365 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 KRT33AO76009 404 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 AKR7A3O95154 331 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CLPTM1O96005 669 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 IGHMP01871 453 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 OPN1MWP04001 364 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CRYBA1P05813 215 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CSF1P09603 554 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 UBTFL6P0CB48 400 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 OPN1MW2P0DN77 364 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 OPN1MW3P0DN78 364 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF14P17017 642 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 GUCY2DQ02846 1103 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CLCQ05315 142 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 PAX8Q06710 450 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 RASA2Q15283 850 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 UNC50Q53HI1 259 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 OXLD1Q5BKU9 147 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 KLC3Q6P597 504 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 C3orf62Q6ZUJ4 267 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 USP51Q70EK9 711 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 CCDC91Q7Z6B0 441 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 FAM71CQ8NEG0 241 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 METTL6Q8TCB7 284 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 TRIM44Q96DX7 344 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 GAL3ST1Q99999 423 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 NAA11Q9BSU3 229 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 SF3B5Q9BWJ5 86 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 LINC00470Q9BZP3 86 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 TRIM31Q9BZY9 425 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 VPS11Q9H270 941 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 KCNF1Q9H3M0 494 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 ACSS3Q9H6R3 686 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 NECAP2Q9NVZ3 263 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 DUSP13Q9UII6 198 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 TMCO1Q9UM00 188 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 TIMM22Q9Y584 194 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 SPIN1Q9Y657 262 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 DSPPQ9NZW4 1301 aa6.47□□□□□ -1.37
SMARCE1-217ENST00000580654 DOCK11Q5JSL3 2073 aa6.46□□□□□ -1.37
SMARCE1-217ENST00000580654 A0A1W2PPW3 197 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 AQP7P3A6NL99 342 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 A8MT66 165 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 RPL36A-HNRNPH2H7BZ11 118 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 M0R082 166 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 ANKRD28O15084 1053 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 FCMRO60667 390 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 SMIM24O75264 130 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 ERLIN1O75477 346 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 UGT2B17O75795 530 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 CSTAP01040 98 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 HMOX2P30519 316 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 CD80P33681 288 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 PGM1P36871 562 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 SH3BGRP55822 239 aaPredicted RBP6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 LCP2Q13094 533 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 PDCD1Q15116 288 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 ZNF141Q15928 474 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 MAPK14Q16539 360 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 MMEL1Q495T6 779 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 GLIPR1L2Q4G1C9 344 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 SPDYAQ5MJ70 313 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 NOXRED1Q6NXP6 359 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 NIPAL3Q6P499 406 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 EMBQ6PCB8 327 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 Q6YL49 198 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 CREB3L2Q70SY1 520 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 GRINAQ7Z429 371 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 GPAT4Q86UL3 456 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 EPHX4Q8IUS5 362 aa6.46□□□□□ -1.38
SMARCE1-217ENST00000580654 OR52E2Q8NGJ4 325 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms