RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CMTM5Q96DZ9 223 aa21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 PLPPR2Q96GM1 343 aa21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 ZNF385AQ96PM9 386 aaKnown RBP21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 HS3ST6Q96QI5 342 aa21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 TMEM43Q9BTV4 400 aa21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 UBTD1Q9HAC8 227 aa21.9■■□□□ 1.1
CDC42EP4-205ENST00000580315 ELOVL7A1L3X0 281 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CPSF4LA6NMK7 179 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CHP2O43745 196 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 FZD7O75084 574 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 LOXP28300 417 aaPredicted RBP21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 PPA1Q15181 289 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 TIMM23BQ5SRD1 257 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CREB3L2Q70SY1 520 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 TREML1Q86YW5 311 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 MICU2Q8IYU8 434 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 POMGNT2Q8NAT1 580 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CCL19Q99731 98 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 ESRP2Q9H6T0 727 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 USP22Q9UPT9 525 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 B3GALT5Q9Y2C3 310 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CORINQ9Y5Q5 1042 aa21.89■■□□□ 1.09
CDC42EP4-205ENST00000580315 CSPG4Q6UVK1 2322 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 TRAPPC13A5PLN9 417 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 M0R082 166 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 DYNC1I1O14576 645 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 RAD51DO75771 328 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ZNF43P17038 809 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 GRPRP30550 384 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 CRYBA2P53672 197 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 GYS2P54840 703 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 TSPO2Q5TGU0 170 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 OR7E24Q6IFN5 339 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 H1FNTQ75WM6 255 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ABHD12BQ7Z5M8 362 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 YTHDF3Q7Z739 585 aaKnown RBP21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 RBM45Q8IUH3 476 aaKnown RBP21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 C10orf53Q8N6V4 93 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 OR4D11Q8NGI4 311 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ZNF417Q8TAU3 575 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ADAMTS16Q8TE57 1224 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ZNF587Q96SQ5 575 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 BDH2Q9BUT1 245 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 ASPNQ9BXN1 380 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 MYLK2Q9H1R3 596 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 SLCO5A1Q9H2Y9 848 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 SLC7A10Q9NS82 523 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 CMTM6Q9NX76 183 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 SH3GLB1Q9Y371 365 aa21.88■■□□□ 1.09
CDC42EP4-205ENST00000580315 HIVEP2P31629 2446 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 OR6C65A6NJZ3 312 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 OR5H1A6NKK0 313 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 NDUFAB1O14561 156 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 KRT33AO76009 404 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 NUDT2P50583 147 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 IL1RL1Q01638 556 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 TGFBR3Q03167 851 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 C1DQ13901 141 aaKnown RBP21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 LRRC23Q53EV4 343 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 HACD2Q6Y1H2 254 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 ZNF704Q6ZNC4 412 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 CARM1Q86X55 608 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 SLC15A3Q8IY34 581 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 ADPRHL1Q8NDY3 354 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 PERPQ96FX8 193 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 MPP4Q96JB8 637 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 OXGR1Q96P68 337 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 PCDHAC1Q9H158 963 aa21.87■■□□□ 1.09
CDC42EP4-205ENST00000580315 KIAA1324LA8MWY0 1029 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 SMAD7O15105 426 aaKnown RBP21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 NQO1P15559 274 aaKnown RBP21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 PCSK6P29122 969 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 PRDX6P30041 224 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 KDELR2P33947 212 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 LIPEQ05469 1076 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 CYBRD1Q53TN4 286 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 TTC33Q6PID6 262 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 C20orf204Q6ZNR8 217 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 EPHX4Q8IUS5 362 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 KDM8Q8N371 416 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 SCAIQ8N9R8 606 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 SEC14L4Q9UDX3 406 aa21.86■■□□□ 1.09
CDC42EP4-205ENST00000580315 TRIM64A6NGJ6 449 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 TRIM64BA6NI03 449 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 PDLIM1O00151 329 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 AKAP8O43823 692 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 BGLAPP02818 100 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 ITGA5P08648 1049 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 CBLP22681 906 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 SLC7A2P52569 658 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 NCMAPQ5T1S8 102 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 NIPAL3Q6P499 406 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 LINC00114Q6XXX2 140 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 MUS81Q96NY9 551 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 MDFIQ99750 246 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 TMEM204Q9BSN7 226 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 POLR2J2Q9GZM3 115 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 POLR2J3Q9H1A7 115 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 SLC7A7Q9UM01 511 aa21.85■■□□□ 1.09
CDC42EP4-205ENST00000580315 RCE1Q9Y256 329 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms