RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 UMPSP11172 480 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 TNFRSF1BP20333 461 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 MPGP29372 298 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 SELENOPP49908 381 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 GYS2P54840 703 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 POU3F1Q03052 451 aaPredicted RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 LIPEQ05469 1076 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 BSPH1Q075Z2 132 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 PMS2P3Q13401 168 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 NPTX1Q15818 432 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 ACKR1Q16570 336 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 CYBRD1Q53TN4 286 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 HMBOX1Q6NT76 420 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 ADAM5Q6NVV9 412 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 TTC33Q6PID6 262 aaPredicted RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 KLHL17Q6TDP4 642 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 SPNS3Q6ZMD2 512 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 CREB3L2Q70SY1 520 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 H1FNTQ75WM6 255 aaPredicted RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 RBM45Q8IUH3 476 aaKnown RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 KDM8Q8N371 416 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 C17orf78Q8N4C9 275 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 AKAP1Q92667 903 aaKnown RBP eCLIP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 PIGTQ969N2 578 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 MBD6Q96DN6 1003 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 ZNF583Q96ND8 569 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 OXGR1Q96P68 337 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 WFDC6Q9BQY6 131 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 TMEM43Q9BTV4 400 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 BEX4Q9NWD9 120 aaPredicted RBP9.6□□□□□ -0.87
NDEL1-208ENST00000580237 POU2F3Q9UKI9 436 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 RCE1Q9Y256 329 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 CSMD2Q7Z408 3487 aa9.6□□□□□ -0.87
NDEL1-208ENST00000580237 M0R1B8 84 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 DYNC1I1O14576 645 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 HS3ST1O14792 307 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 SNX3O60493 162 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 TPST2O60704 377 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 SHOX2O60902 331 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 SLC43A1O75387 559 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 ZNF682O95780 498 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 PLAUP00749 431 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 MT-ATP6P00846 226 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 CD53P19397 219 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 DRD4P21917 467 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 AHCYP23526 432 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 LOXP28300 417 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 IFNA8P32881 189 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 NTF4P34130 210 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 ZNF83P51522 516 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 P2RY4P51582 365 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 CRYBA2P53672 197 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 PUDPQ08623 228 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 FOXD4Q12950 439 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 TESK1Q15569 626 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 NCMAPQ5T1S8 102 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 TMEM108Q6UXF1 575 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 NANOGNBQ7Z5D8 188 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 TREML1Q86YW5 311 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 EPHX4Q8IUS5 362 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 GPR137CQ8N3F9 429 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 SCAIQ8N9R8 606 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 ADPRHL1Q8NDY3 354 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 KBTBD8Q8NFY9 601 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 OR4D11Q8NGI4 311 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 OR6S1Q8NH40 331 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 TMEM171Q8WVE6 324 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 FBXW5Q969U6 566 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 FAM162AQ96A26 154 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 SLC41A3Q96GZ6 507 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 MPP4Q96JB8 637 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 HOPXQ9BPY8 73 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 KCTD14Q9BQ13 255 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 ALG2Q9H553 416 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 CMTM6Q9NX76 183 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 AMDHD2Q9Y303 409 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 MAGED1Q9Y5V3 778 aaPredicted RBP9.59□□□□□ -0.87
NDEL1-208ENST00000580237 USF3Q68DE3 2245 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
NDEL1-208ENST00000580237 LRRN3E7EW58 273 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 C11orf98E9PRG8 122 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CXCR6O00574 342 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 NME4O00746 187 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ABCD4O14678 606 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 GMNNO75496 209 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CH25HO95992 272 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 WNT11O96014 354 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 BGLAPP02818 100 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 HIST1H2ABP04908 130 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ADORA3P0DMS8 318 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 PRDX6P30041 224 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 KDELR2P33947 212 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 OR1E2P47887 323 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 CDH11P55287 796 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 FOXG1P55316 489 aaPredicted RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 SH3BGRP55822 239 aaPredicted RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 PRPS1P60891 318 aa9.58□□□□□ -0.88
NDEL1-208ENST00000580237 UBE2NP61088 152 aaKnown RBP9.58□□□□□ -0.88
NDEL1-208ENST00000580237 ROR2Q01974 943 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms