RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 BCL2A1Q16548 175 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 PGGHGQ32M88 737 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 ALG10Q5BKT4 473 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 CLEC12AQ5QGZ9 265 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 RBM48Q5RL73 367 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 C12orf73Q69YU5 71 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 GPR139Q6DWJ6 353 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 SIAH3Q8IW03 269 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 LNX2Q8N448 690 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 OR5M1Q8NGP8 315 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 CPT1CQ8TCG5 803 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 FAR1Q8WVX9 515 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MOGAT1Q96PD6 335 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 POLDIP3Q9BY77 421 aaKnown RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 DEFB127Q9H1M4 99 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 ZDHHC11Q9H8X9 412 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 CHST11Q9NPF2 352 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 ASF1BQ9NVP2 202 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 NPIPA1Q9UND3 350 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.41
CSNK1D-209ENST00000578904 A0A1W2PRG6 482 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 SH3D21A4FU49 640 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 RNF13O43567 381 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 VAMP5O95183 116 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 CLIC3O95833 236 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 CD14P08571 375 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF3P17036 446 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 EPHA2P29317 976 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 GRPRP30550 384 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 PCYT1AP49585 367 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 CXCR4P61073 352 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 ISL1P61371 349 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 SNRPGP62308 76 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 ZP4Q12836 540 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 MAD2L1BPQ15013 274 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 EMC4Q5J8M3 183 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM236Q5W0B7 351 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 CHMP1BQ7LBR1 199 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 HDDC2Q7Z4H3 204 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF786Q8N393 782 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 LRRC17Q8N6Y2 441 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 SMPDL3BQ92485 455 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 HDAC2Q92769 488 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 RFKQ969G6 155 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 FN3KQ9H479 309 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM185BQ9H7F4 350 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 INIPQ9NRY2 104 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 TPRKBQ9Y3C4 175 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
CSNK1D-209ENST00000578904 TRGV5A0A0B4J1U4 118 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 FTCDNL1E5RQL4 147 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 M0R082 166 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ARPC3O15145 178 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 EFNA2O43921 213 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 FZD7O75084 574 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 TSPAN19P0C672 248 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 AHCYP23526 432 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 UQCRC1P31930 480 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 AQP2P41181 271 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 DIO1P49895 249 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 CARD18P57730 90 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 B3GALT5-AS1P59052 145 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 CTXN1P60606 82 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 RAC3P60763 192 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 LTBQ06643 244 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 RPL18Q07020 188 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 PUDPQ08623 228 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 C1QL3Q5VWW1 255 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF324BQ6AW86 544 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 TMEM225Q6GV28 225 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 PAQR6Q6TCH4 344 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 RHOXF1Q8NHV9 184 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ABTB1Q969K4 478 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 GPR137Q96N19 417 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 NPAS1Q99742 590 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 PLA2G12AQ9BZM1 189 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 GRHPRQ9UBQ7 328 aa12.5□□□□□ -0.41
CSNK1D-209ENST00000578904 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms