RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 MPGP29372 298 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 P2RY4P51582 365 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 CLDN17P56750 224 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 PMS2P3Q13401 168 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 ACKR1Q16570 336 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 KLHL17Q6TDP4 642 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 RBM45Q8IUH3 476 aaKnown RBP10.24□□□□□ -0.77
GGA3-204ENST00000578208 SLC15A3Q8IY34 581 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 C17orf78Q8N4C9 275 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 ZIC4Q8N9L1 334 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 OR4D11Q8NGI4 311 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 OR52N5Q8NH56 324 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 PIGTQ969N2 578 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 MBD6Q96DN6 1003 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 SLC41A3Q96GZ6 507 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 ALPK1Q96QP1 1244 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 CCL19Q99731 98 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 KCTD14Q9BQ13 255 aaPredicted RBP10.24□□□□□ -0.77
GGA3-204ENST00000578208 SLC19A3Q9BZV2 496 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 PCDHAC1Q9H158 963 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 ALG2Q9H553 416 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 BEX4Q9NWD9 120 aaPredicted RBP10.24□□□□□ -0.77
GGA3-204ENST00000578208 MRPL39Q9NYK5 338 aaKnown RBP10.24□□□□□ -0.77
GGA3-204ENST00000578208 SEC14L4Q9UDX3 406 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 ARL2BPQ9Y2Y0 163 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 AMDHD2Q9Y303 409 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 MAGED1Q9Y5V3 778 aaPredicted RBP10.24□□□□□ -0.77
GGA3-204ENST00000578208 PDZD2O15018 2839 aa10.24□□□□□ -0.77
GGA3-204ENST00000578208 POLQO75417 2590 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 CXCR6O00574 342 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 KPNA4O00629 521 aaPredicted RBP10.23□□□□□ -0.77
GGA3-204ENST00000578208 NME4O00746 187 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 GMNNO75496 209 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 OR5F1O95221 314 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 WNT11O96014 354 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 BGLAPP02818 100 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 HIST1H2ABP04908 130 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 ITGA5P08648 1049 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 UMPSP11172 480 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 CDH2P19022 906 aaPredicted RBP10.23□□□□□ -0.77
GGA3-204ENST00000578208 CD53P19397 219 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 TNFRSF1BP20333 461 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 AHCYP23526 432 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 LOXP28300 417 aaPredicted RBP10.23□□□□□ -0.77
GGA3-204ENST00000578208 NTF4P34130 210 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 GSK3BP49841 420 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 SELENOPP49908 381 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 CRYBA2P53672 197 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 PUDPQ08623 228 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 GABRA6Q16445 453 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 NCMAPQ5T1S8 102 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 HMBOX1Q6NT76 420 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 SPNS3Q6ZMD2 512 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 HIST3H2AQ7L7L0 130 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 EPHX4Q8IUS5 362 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 KDM8Q8N371 416 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 GPR137CQ8N3F9 429 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 HIST1H2ACQ93077 130 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 FAM162AQ96A26 154 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 ALKBH3Q96Q83 286 aaPredicted RBP10.23□□□□□ -0.77
GGA3-204ENST00000578208 LRRC37BQ96QE4 947 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 LINC00470Q9BZP3 86 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 FKRPQ9H9S5 495 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 SPAG4Q9NPE6 437 aa10.23□□□□□ -0.77
GGA3-204ENST00000578208 MPDZO75970 2070 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 CSMD1Q96PZ7 3565 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 LOC102725191A0A1B0GVB3 256 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 ZNF726A6NNF4 738 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 PDLIM1O00151 329 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 HS3ST1O14792 307 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 SHOX2O60902 331 aaPredicted RBP10.22□□□□□ -0.77
GGA3-204ENST00000578208 SMPD2O60906 423 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 SERPINI2O75830 405 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 ZNF682O95780 498 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 IFNW1P05000 195 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 THRBP10828 461 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 RBM34P42696 430 aaKnown RBP10.22□□□□□ -0.77
GGA3-204ENST00000578208 OR1E2P47887 323 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 ZNF83P51522 516 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 FOXG1P55316 489 aaPredicted RBP10.22□□□□□ -0.77
GGA3-204ENST00000578208 SH3BGRP55822 239 aaPredicted RBP10.22□□□□□ -0.77
GGA3-204ENST00000578208 PSME3P61289 254 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 SELENOWP63302 87 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 MXRA7P84157 204 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 POU3F1Q03052 451 aaPredicted RBP10.22□□□□□ -0.77
GGA3-204ENST00000578208 BSPH1Q075Z2 132 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 TESK1Q15569 626 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 C1QTNF12Q5T7M4 302 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 LINC00114Q6XXX2 140 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 NANOGNBQ7Z5D8 188 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 PIK3C3Q8NEB9 887 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 OR5J2Q8NH18 312 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 TMEM171Q8WVE6 324 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
GGA3-204ENST00000578208 HS6ST2Q96MM7 605 aa10.22□□□□□ -0.77
GGA3-204ENST00000578208 MUS81Q96NY9 551 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms