RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 MYOZ1Q9NP98 299 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-213ENST00000578044 FBN1P35555 2871 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-213ENST00000578044 M0R1B8 84 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 NDUFS8O00217 210 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 AIM2O14862 343 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SERPINB7O75635 380 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 IGKV3-15P01624 115 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 C8BP07358 591 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 ZNF43P17038 809 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 FABP6P51161 128 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 CDK6Q00534 326 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 RBBP4Q09028 425 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 TBRG1Q3YBR2 411 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 GCNT6Q5T4J0 391 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 B3GLCTQ6Y288 498 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 GPAT4Q86UL3 456 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 DPP10Q8N608 796 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SCAIQ8N9R8 606 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 IL17RDQ8NFM7 739 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 OR1K1Q8NGR3 316 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SLC47A1Q96FL8 570 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 ATP6V1G3Q96LB4 118 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 ZNF607Q96SK3 696 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 SIKE1Q9BRV8 207 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 ADPRHL2Q9NX46 363 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 B3GAT1Q9P2W7 334 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 MALRD1Q5VYJ5 2156 aa12.66□□□□□ -0.38
SMARCE1-213ENST00000578044 TRAV36DV7A0A075B6V5 113 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 A0A087WUJ7 227 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 EVPLLA8MZ36 301 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 KRT33AO76009 404 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 F12P00748 615 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 NUDT7P0C024 238 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 PCSK6P29122 969 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 NUDT6P53370 316 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 VLDLRP98155 873 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 BNIP2Q12982 314 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 SQLEQ14534 574 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 EFNB3Q15768 340 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 H1FNTQ75WM6 255 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 OR4F15Q8NGB8 312 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 SPATA3Q8NHX4 192 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 MAL2Q969L2 176 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 SLC38A2Q96QD8 506 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 TNFRSF13CQ96RJ3 184 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 EPYCQ99645 322 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 TMEM43Q9BTV4 400 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 DENND2DQ9H6A0 471 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 VAPAQ9P0L0 249 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 RPS6KB2Q9UBS0 482 aa12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 GDF2Q9UK05 429 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-213ENST00000578044 A0A1B0GWA3 101 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 NDUFS7O75251 213 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SLC43A1O75387 559 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 CRYAAP02489 173 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SLC6A2P23975 617 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 GTF2E2P29084 291 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 THBS2P35442 1172 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SELENOPP49908 381 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 PCBP3P57721 371 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 UBE2NP61088 152 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 ADRM1Q16186 407 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 METTL21CQ5VZV1 264 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 HMBOX1Q6NT76 420 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 DLEU7Q6UYE1 221 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SLC30A8Q8IWU4 369 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 HIPK4Q8NE63 616 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 PIK3C3Q8NEB9 887 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 KTI12Q96EK9 354 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 RSPO3Q9BXY4 272 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 ZNF442Q9H7R0 627 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 SLCO1B3Q9NPD5 702 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 CCDC167Q9P0B6 97 aa12.64□□□□□ -0.39
SMARCE1-213ENST00000578044 IGKV1D-42A0A075B6H8 117 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 A0A0B4J2E0 115 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 IGHV1-18A0A0C4DH31 117 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 A0A1B0GX12 115 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 VSTM5A8MXK1 200 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 B9A039 149 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 SSX4O60224 188 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 MT-ATP6P00846 226 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 CBR1P16152 277 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 ARR3P36575 388 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 AQP5P55064 265 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 PAGE3Q5JUK9 113 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
SMARCE1-213ENST00000578044 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms