RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CRATP43155 626 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 MVDP53602 400 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 TUBA1BP68363 451 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 TUBA4AP68366 448 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 ROR2Q01974 943 aaKnown RBP9.07□□□□□ -0.96
TVP23B-208ENST00000575261 SQLEQ14534 574 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 PDCD4Q53EL6 469 aaKnown RBP9.07□□□□□ -0.96
TVP23B-208ENST00000575261 RPS26P11Q5JNZ5 115 aaPredicted RBP9.07□□□□□ -0.96
TVP23B-208ENST00000575261 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 TUBA1AQ71U36 451 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 LINGO2Q7L985 606 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 SERPINA11Q86U17 422 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 EPHX4Q8IUS5 362 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 ANKK1Q8NFD2 765 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 MFSD8Q8NHS3 518 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 SLC38A5Q8WUX1 472 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 TMEM19Q96HH6 336 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 PAIP2Q9BPZ3 127 aaKnown RBP9.07□□□□□ -0.96
TVP23B-208ENST00000575261 SPATA9Q9BWV2 254 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 NELFAQ9H3P2 528 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 CENPHQ9H3R5 247 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF442Q9H7R0 627 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 TPT1P8Q9HAU6 139 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 KCNK9Q9NPC2 374 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 SLC6A13Q9NSD5 602 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 THUMPD1Q9NXG2 353 aaKnown RBP9.07□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF232Q9UNY5 417 aa9.07□□□□□ -0.96
TVP23B-208ENST00000575261 A0A0G2JPF8 293 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 VSTM5A8MXK1 200 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 HNRNPCL2B2RXH8 293 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 HNRNPCL3B7ZW38 293 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 FTCDNL1E5RQL4 147 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 hCG_2039718K7EN88 272 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 AKAP8O43823 692 aaKnown RBP9.06□□□□□ -0.96
TVP23B-208ENST00000575261 HNRNPCL1O60812 293 aaKnown RBP9.06□□□□□ -0.96
TVP23B-208ENST00000575261 SLC43A1O75387 559 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 SLC22A3O75751 556 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 C8BP07358 591 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 ZCCHC18P0CG32 403 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 HNRNPCL4P0DMR1 293 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 DAOP14920 347 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 RPS5P46782 204 aaKnown RBP9.06□□□□□ -0.96
TVP23B-208ENST00000575261 CLDN17P56750 224 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 ATG16L1Q676U5 607 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 MSANTD1Q6ZTZ1 278 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 CLIP4Q8N3C7 705 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 GPR137CQ8N3F9 429 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 NEU4Q8WWR8 484 aaPredicted RBP9.06□□□□□ -0.96
TVP23B-208ENST00000575261 SLC35B4Q969S0 331 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 SLC25A36Q96CQ1 311 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 ANKRD27Q96NW4 1050 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 PTDSS2Q9BVG9 487 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 WDR55Q9H6Y2 383 aaPredicted RBP9.06□□□□□ -0.96
TVP23B-208ENST00000575261 RMND5AQ9H871 391 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 SEC61A2Q9H9S3 476 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 IFT52Q9Y366 437 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 CHST2Q9Y4C5 530 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
TVP23B-208ENST00000575261 LRP5LA4QPB2 252 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 SLCO1B7G3V0H7 640 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 AIM2O14862 343 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 FZD7O75084 574 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF432O94892 652 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 STAMBPO95630 424 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 CELA3BP08861 270 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 CBR1P16152 277 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 NPR2P20594 1047 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 GIFP27352 417 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 THBS4P35443 961 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 ARR3P36575 388 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 CHN2P52757 468 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 SRSF2Q01130 221 aaKnown RBP9.05□□□□□ -0.96
TVP23B-208ENST00000575261 EGR4Q05215 589 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 NPRL3Q12980 569 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 MPP2Q14168 576 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 ZNF311Q5JNZ3 666 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 C6orf10Q5SRN2 563 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 HHATQ5VTY9 493 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 LIPNQ5VXI9 398 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 NXNQ6DKJ4 435 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 C5orf46Q6UWT4 87 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 C6orf89Q6UWU4 347 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 SPATA21Q7Z572 469 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 MYPOPQ86VE0 399 aaPredicted RBP9.05□□□□□ -0.96
TVP23B-208ENST00000575261 CCDC36Q8IYA8 594 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 KDM8Q8N371 416 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 SVOPLQ8N434 492 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 VPS33AQ96AX1 596 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 KTI12Q96EK9 354 aaPredicted RBP9.05□□□□□ -0.96
TVP23B-208ENST00000575261 ITCHQ96J02 903 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 OXGR1Q96P68 337 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 SOX7Q9BT81 388 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 C12orf10Q9HB07 376 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 DYNLRB1Q9NP97 96 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 THAP1Q9NVV9 213 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 ZIM2Q9NZV7 527 aa9.05□□□□□ -0.96
TVP23B-208ENST00000575261 B3GAT1Q9P2W7 334 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms