RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 CCDC168Q8NDH2 2452 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR5F1O95221 314 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 SERPINA1P01009 418 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 NCK1P16333 377 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 SELENOPP49908 381 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 CLDN17P56750 224 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 PIN1Q13526 163 aaPredicted RBP18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 C9orf135Q5VTT2 229 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 VTCN1Q7Z7D3 282 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 RNF148Q8N7C7 305 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 SCAIQ8N9R8 606 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 POMGNT2Q8NAT1 580 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 ADPRHL1Q8NDY3 354 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 PLEKHF2Q9H8W4 249 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 B3GAT1Q9P2W7 334 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 ST6GALNAC2Q9UJ37 374 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 EDARQ9UNE0 448 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 ABCA4P78363 2273 aa18.26■□□□□ 0.51
HCFC1R1-208ENST00000575214 PDZD2O15018 2839 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 KLF4O43474 513 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 KRT33AO76009 404 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 MT-ATP6P00846 226 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 ITGA5P08648 1049 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 FOXG1P55316 489 aaPredicted RBP18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 MXRA7P84157 204 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 FOXD4Q12950 439 aaPredicted RBP18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 PMS2P3Q13401 168 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 CBLL1Q75N03 491 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 UEVLDQ8IX04 471 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 PGAM4Q8N0Y7 254 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 CCDC197Q8NCU1 140 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 PLPPR2Q96GM1 343 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 HS3ST6Q96QI5 342 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 PRSS27Q9BQR3 290 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 NGBQ9NPG2 151 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 MRPL39Q9NYK5 338 aaKnown RBP18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 EGFL7Q9UHF1 273 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 RIMS3Q9UJD0 308 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 PLEKHA6Q9Y2H5 1048 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 OTOGQ6ZRI0 2925 aa18.25■□□□□ 0.51
HCFC1R1-208ENST00000575214 SPG11Q96JI7 2443 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 CH25HO95992 272 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 IFNW1P05000 195 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 IFNA8P32881 189 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 NR1H2P55055 460 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 SLC25A3Q00325 362 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 PPA1Q15181 289 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 TIMM23BQ5SRD1 257 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 PAMR1Q6UXH9 720 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 FKBP9P1Q75LS8 142 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 NKAIN4Q8IVV8 208 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 FITM2Q8N6M3 262 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 GEMIN6Q8WXD5 167 aaKnown RBP18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 MUCL1Q96DR8 90 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 HSH2DQ96JZ2 352 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 ZNF426Q9BUY5 554 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 SLC19A3Q9BZV2 496 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR5H1A6NKK0 313 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 ENO4A6NNW6 628 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 MS4A18H0YCH9 400 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 PDLIM1O00151 329 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 AKAP8O43823 692 aaKnown RBP18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 GMNNO75496 209 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 TCN1P20061 433 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 DNASE1P24855 282 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 LOXP28300 417 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 TGFBR3Q03167 851 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 PUDPQ08623 228 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 ZNF74Q16587 644 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 MS4A18Q3C1V0 323 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 IFI44LQ53G44 452 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 ABHD12BQ7Z5M8 362 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 P2RY8Q86VZ1 359 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR5J2Q8NH18 312 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 TMEM255BQ8WV15 326 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 NINJ1Q92982 152 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 PRRC1Q96M27 445 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 ALKBH3Q96Q83 286 aaPredicted RBP18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 AMBRA1Q9C0C7 1298 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 FKRPQ9H9S5 495 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 NANSQ9NR45 359 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 NDE1Q9NXR1 346 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 RCE1Q9Y256 329 aa18.23■□□□□ 0.51
HCFC1R1-208ENST00000575214 LOC102725191A0A1B0GVB3 256 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR6C65A6NJZ3 312 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 TRAF3IP2O43734 574 aaPredicted RBP18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 HPRP00739 348 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 UMPSP11172 480 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 AHCYP23526 432 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 MPGP29372 298 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 RBM34P42696 430 aaKnown RBP18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 YAP1P46937 504 aaKnown RBP18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 MNAT1P51948 309 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 POU3F1Q03052 451 aaPredicted RBP18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 LGALS3BPQ08380 585 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 KRT72Q14CN4 511 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 GLYATQ6IB77 296 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR7E24Q6IFN5 339 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms