RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CD79BP40259 229 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 YAP1P46937 504 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 OR3A2P47893 321 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 P2RY4P51582 365 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 SMIM11AP58511 58 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 POU4F3Q15319 338 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 ZNF474Q6S9Z5 364 aaPredicted RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 WDR88Q6ZMY6 472 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 RRM2BQ7LG56 351 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 GPAT4Q86UL3 456 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 CDH24Q86UP0 819 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 TSPYL5Q86VY4 417 aaPredicted RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 P3H2Q8IVL5 708 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 NKAIN4Q8IVV8 208 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 OFCC1Q8IZS5 231 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 ACBD4Q8NC06 268 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 OR9K2Q8NGE7 335 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 TMEM45BQ96B21 275 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 OXGR1Q96P68 337 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 HDHD5Q9BXW7 423 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 MMADHCQ9H3L0 296 aaPredicted RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 NPDC1Q9NQX5 325 aaPredicted RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 NANSQ9NR45 359 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 GALNT8Q9NY28 637 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 MRPL39Q9NYK5 338 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 NDRG3Q9UGV2 375 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 FLVCR1Q9Y5Y0 555 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 SPG11Q96JI7 2443 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 LOC102725191A0A1B0GVB3 256 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 J3KTA2 159 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 M0R082 166 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 RAMP1O60894 148 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 OR6A2O95222 327 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 CH25HO95992 272 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 FABP3P05413 133 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 UMPSP11172 480 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 NQO1P15559 274 aaKnown RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF43P17038 809 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 HOXB6P17509 224 aaKnown RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 CBLP22681 906 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 KIR2DL3P43628 341 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 MS4A2Q01362 244 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 LTBQ06643 244 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 PMS2P3Q13401 168 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 C1DQ13901 141 aaKnown RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF74Q16587 644 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 EXOC3L2Q2M3D2 409 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 TFAP2EQ6VUC0 442 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 CYP2R1Q6VVX0 501 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 SPNS3Q6ZMD2 512 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 CDK20Q8IZL9 346 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 PIK3C3Q8NEB9 887 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 OR5J2Q8NH18 312 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 TMEM255BQ8WV15 326 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 APH1AQ96BI3 265 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 SGTBQ96EQ0 304 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 C7orf34Q96L11 122 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 DOCK7Q96N67 2140 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF347Q96SE7 839 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF587Q96SQ5 575 aaPredicted RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 USB1Q9BQ65 265 aaKnown RBP9.78□□□□□ -0.84
CHD3-216ENST00000573936 OR10A4Q9H209 315 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 IL1RAPQ9NPH3 570 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 NDUFAF4Q9P032 175 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 KCNN3Q9UGI6 736 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 SLC7A8Q9UHI5 535 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 GPR52Q9Y2T5 361 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 V9GYQ6 96 aa9.78□□□□□ -0.84
CHD3-216ENST00000573936 A0A1W2PRQ8 180 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 TUBAL3A6NHL2 446 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 OR6C65A6NJZ3 312 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 AQP12BA6NM10 295 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 C16orf97H3BN30 126 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 KPNA4O00629 521 aaPredicted RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 PLPP3O14495 311 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ACOT8O14734 319 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 FFAR1O14842 300 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 AKAP8O43823 692 aaKnown RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 OR7A10O76100 309 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 PRSS23O95084 383 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 SEMG1P04279 462 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
CHD3-216ENST00000573936 PPP3CBP16298 524 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 PTNP21246 168 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ATP6V1B2P21281 511 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 UGT2B15P54855 530 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 CHRNB3Q05901 458 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 PUDPQ08623 228 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 ZP4Q12836 540 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 DGCR6Q14129 220 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 P2RY6Q15077 328 aa9.77□□□□□ -0.85
CHD3-216ENST00000573936 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms