RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 GEMIN6Q8WXD5 167 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 FBXW5Q969U6 566 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 HSH2DQ96JZ2 352 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 HDHD5Q9BXW7 423 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 DCAF13Q9NV06 445 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 KLHL13Q9P2N7 655 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CADP27708 2225 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 ATRQ13535 2644 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 CR1P17927 2039 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 CLOCKO15516 846 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 IFNW1P05000 195 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 SOD3P08294 240 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 DANCRP0C864 163 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TFPIP10646 304 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TRAP1Q12931 704 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 RNPS1Q15287 305 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 OR1Q1Q15612 314 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 SFRP5Q5T4F7 317 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TRMT61AQ96FX7 289 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 COQ10BQ9H8M1 238 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TIGARQ9NQ88 270 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 OSGIN1Q9UJX0 560 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 ABCA1O95477 2261 aa13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 FBN1P35555 2871 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-207ENST00000572346 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ETV2O00321 342 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 FMO6PO60774 539 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 PRKD3O94806 890 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 CD3EP07766 207 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ATP6V1B2P21281 511 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 IL32P24001 234 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 HTR2AP28223 471 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 SLC7A1P30825 629 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 TAS2R41P59536 307 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 MS4A2Q01362 244 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ETFDHQ16134 617 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 TMEM176BQ3YBM2 270 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ALG10BQ5I7T1 473 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ENTPD8Q5MY95 495 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 FCRLAQ7L513 359 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ATG4DQ86TL0 474 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 LSMEM1Q8N8F7 131 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 SLC25A43Q8WUT9 341 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 HSD17B8Q92506 261 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 PYURFQ96I23 114 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 ESRP2Q9H6T0 727 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 GP6Q9HCN6 339 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 NGBQ9NPG2 151 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 CHRNA9Q9UGM1 479 aa13.09□□□□□ -0.31
NPLOC4-207ENST00000572346 TMEM229AB2RXF0 380 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 TPST2O60704 377 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 CIB2O75838 187 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 ADAP00813 363 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 YES1P07947 543 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 FKBP2P26885 142 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 IDUAP35475 653 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 CDKN1AP38936 164 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 FLOT2Q14254 428 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 NPTX1Q15818 432 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 ZNF613Q6PF04 617 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 SEZ6L2Q6UXD5 910 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 SMAP2Q8WU79 429 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 KISS1RQ969F8 398 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 GTPBP3Q969Y2 492 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 DDIT4LQ96D03 193 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 SEPHS2Q99611 448 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 REG4Q9BYZ8 158 aa13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 FAM32AQ9Y421 112 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-207ENST00000572346 MAGED1Q9Y5V3 778 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms