RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 LRRN3E7EW58 273 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 M0R3H8 397 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ANGPT2O15123 496 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 TPST2O60704 377 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 EDF1O60869 148 aaKnown RBP12.02□□□□□ -0.49
RAB40B-204ENST00000571554 VAMP5O95183 116 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 H2AFXP16104 143 aaPredicted RBP12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ZNF43P17038 809 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 PRPS1P60891 318 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ROR2Q01974 943 aaKnown RBP12.02□□□□□ -0.49
RAB40B-204ENST00000571554 OR1Q1Q15612 314 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 TBRG1Q3YBR2 411 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 C11orf71Q6IPW1 123 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 C6orf89Q6UWU4 347 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 PTOV1Q86YD1 416 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 FBXL14Q8N1E6 418 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 MUC15Q8N387 334 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 HIPK4Q8NE63 616 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 SLC35B4Q969S0 331 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 REG4Q9BYZ8 158 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 PIF1Q9H611 641 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 CBLN4Q9NTU7 201 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 TMEM45AQ9NWC5 275 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 B3GAT1Q9P2W7 334 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 CORO2BQ9UQ03 480 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ANGPT4Q9Y264 503 aa12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ANK3Q12955 4377 aaKnown RBP12.02□□□□□ -0.49
RAB40B-204ENST00000571554 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 TRAV36DV7A0A075B6V5 113 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 AIM2O14862 343 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 SEC14L2O76054 403 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 WNT11O96014 354 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 NUDT6P53370 316 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 C1DQ13901 141 aaKnown RBP12.01□□□□□ -0.49
RAB40B-204ENST00000571554 NFYCQ13952 458 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 FAM69AQ5T7M9 428 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 CARD17Q5XLA6 110 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 HMBOX1Q6NT76 420 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 ABHD12BQ7Z5M8 362 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-204ENST00000571554 C10orf53Q8N6V4 93 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 LSMEM1Q8N8F7 131 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 VANGL1Q8TAA9 524 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-204ENST00000571554 SLC38A4Q969I6 547 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 ANKRD27Q96NW4 1050 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 CGREF1Q99674 301 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 RABEP2Q9H5N1 569 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 SEC61A2Q9H9S3 476 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 TMEM27Q9HBJ8 222 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 SELENONQ9NZV5 590 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 KLHL14Q9P2G3 628 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 TESQ9UGI8 421 aaKnown RBP12.01□□□□□ -0.49
RAB40B-204ENST00000571554 GMEB1Q9Y692 573 aa12.01□□□□□ -0.49
RAB40B-204ENST00000571554 HIVEP2P31629 2446 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 IGHV4-30-2A0A087WSY4 118 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 A0A0B4J2E0 115 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 IGHV1-18A0A0C4DH31 117 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 A0A1B0GX12 115 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 SERPINB7O75635 380 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 SERPINI2O75830 405 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 LY6HO94772 140 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 MFN2O95140 757 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 HPRP00739 348 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 HLA-DOBP13765 273 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 CDH12P55289 794 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 PPP2R2BQ00005 443 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 ETFDHQ16134 617 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 PHYHD1Q5SRE7 291 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 ULK3Q6PHR2 472 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 H1FNTQ75WM6 255 aaPredicted RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 RBM45Q8IUH3 476 aaKnown RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 C11orf65Q8NCR3 313 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 GPR32P1Q8NGA4 272 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 DNAJA4Q8WW22 397 aaPredicted RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 BCL2L2Q92843 193 aaPredicted RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 FBXO17Q96EF6 278 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 ZNF837Q96EG3 531 aaPredicted RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 SLC47A1Q96FL8 570 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 ADAD1Q96M93 576 aaKnown RBP12□□□□□ -0.49
RAB40B-204ENST00000571554 MOGAT1Q96PD6 335 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 MCHR1Q99705 422 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 EMC6Q9BV81 110 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 TMEM120AQ9BXJ8 343 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 NELFAQ9H3P2 528 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 FKRPQ9H9S5 495 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 C12orf10Q9HB07 376 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 PRDM4Q9UKN5 801 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 TRIM33Q9UPN9 1127 aa12□□□□□ -0.49
RAB40B-204ENST00000571554 A0A087WUJ7 227 aa11.99□□□□□ -0.49
RAB40B-204ENST00000571554 CPSF4LA6NMK7 179 aaKnown RBP11.99□□□□□ -0.49
RAB40B-204ENST00000571554 MS4A18H0YCH9 400 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms