RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 PAX7P23759 505 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 POLR2JP52435 117 aaKnown RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 UBE2NP61088 152 aaKnown RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 NAAAQ02083 359 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 HGFACQ04756 655 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 RGNQ15493 299 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 ZNF311Q5JNZ3 666 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 MSANTD1Q6ZTZ1 278 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 FAM169BQ8N8A8 192 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 GTF2H4Q92759 462 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 RMND5AQ9H871 391 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 BCL2L10Q9HD36 194 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 THUMPD1Q9NXG2 353 aaKnown RBP12.84□□□□□ -0.35
NDE1-203ENST00000570727 B3GAT1Q9P2W7 334 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 LPAR3Q9UBY5 353 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
NDE1-203ENST00000570727 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 B9A039 149 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 NDUFS8O00217 210 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 AHSA1O95433 338 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 OR4A8P0C604 315 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 BMP2P12643 396 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 HOXB9P17482 250 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 IGFBP5P24593 272 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 GZMKP49863 264 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 CLDN17P56750 224 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 SNRPD2P62316 118 aaKnown RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 ARF1P84077 181 aaKnown RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 MYPOPQ86VE0 399 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 MAL2Q969L2 176 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 MSI2Q96DH6 328 aaKnown RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 OXGR1Q96P68 337 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 ZNF317Q96PQ6 595 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
NDE1-203ENST00000570727 KCNS3Q9BQ31 491 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 PLK3Q9H4B4 646 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 ARMC7Q9H6L4 198 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 A4GALTQ9NPC4 353 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
NDE1-203ENST00000570727 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 CLIC1O00299 241 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 UBDO15205 165 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 PDE5AO76074 875 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 CELA3BP08861 270 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 CBR1P16152 277 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 ZNF43P17038 809 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 THBS2P35442 1172 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 SLC18A1P54219 525 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 EFNB3Q15768 340 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 KRTAP24-1Q3LI83 254 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 SLC2A7Q6PXP3 512 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 VHLLQ6RSH7 139 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 C6orf89Q6UWU4 347 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 SLC46A3Q7Z3Q1 461 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 COMTD1Q86VU5 262 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 ANKK1Q8NFD2 765 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 TAAR8Q969N4 342 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 SLC35B4Q969S0 331 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 DOK1Q99704 481 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
NDE1-203ENST00000570727 LOC100289279A0A1B0GTE1 492 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 TMEM129A0AVI4 362 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 TMEM247A6NEH6 219 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 ZNF503-AS2A6NEH8 195 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 IGFBP1P08833 259 aaPredicted RBP12.81□□□□□ -0.36
NDE1-203ENST00000570727 HTR2AP28223 471 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 THBS4P35443 961 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 SH3BGRP55822 239 aaPredicted RBP12.81□□□□□ -0.36
NDE1-203ENST00000570727 FAM166AQ6J272 317 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 IL17RELQ6ZVW7 336 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 C10orf111Q8N326 155 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 MIER2Q8N344 545 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 LSMEM1Q8N8F7 131 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 NUP37Q8NFH4 326 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 OR4F15Q8NGB8 312 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 SOX7Q9BT81 388 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
NDE1-203ENST00000570727 IGKV1D-42A0A075B6H8 117 aa12.8□□□□□ -0.36
NDE1-203ENST00000570727 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms