RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 P2RX1P51575 399 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PSMD7P51665 324 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NR0B1P51843 470 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MAP2K6P52564 334 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 GBX2P52951 348 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SUMO3P55854 103 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 OR12D2P58182 307 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SLC26A5P58743 744 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ACTA2P62736 377 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PPP3R1P63098 170 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ACTG2P63267 376 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 RNF4P78317 190 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SIRPAP78324 504 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 DCDP81605 110 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PRR20EP86478 221 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PRR20CP86479 221 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PRR20DP86480 221 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PRR20BP86481 221 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PRR20AP86496 221 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MRPL28Q13084 256 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 IL11RAQ14626 422 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NNATQ16517 81 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NKAIN1Q4KMZ8 207 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF684Q5T5D7 378 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 DDI2Q5TDH0 399 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 LINC01590Q5TEZ4 76 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 C1orf189Q5VU69 101 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF385CQ66K41 422 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MZT2AQ6P582 158 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM205Q6UW68 189 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 C5orf46Q6UWT4 87 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 B3GLCTQ6Y288 498 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TRILQ7L0X0 811 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 HIST3H2AQ7L7L0 130 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TMPRSS9Q7Z410 1059 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MARCH3Q86UD3 253 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ADGRG3Q86Y34 549 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MARCH9Q86YJ5 346 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SNX29P2Q8IUI4 249 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ABCA7Q8IZY2 2146 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 POC5Q8NA72 575 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 DTWD2Q8NBA8 298 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 CYB561A3Q8NBI2 242 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SLC38A9Q8NBW4 561 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 FAM98AQ8NCA5 519 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 FAM83FQ8NEG4 500 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 OR10H4Q8NGA5 316 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 OR4K13Q8NH42 304 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MOSPD2Q8NHP6 518 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 CEP76Q8TAP6 659 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NEIL3Q8TAT5 605 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TTC9Q92623 222 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 GHSRQ92847 366 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 HIST1H2ACQ93077 130 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TAAR8Q969N4 342 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 CLIP3Q96DZ5 547 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 OMA1Q96E52 524 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 LMF1Q96S06 567 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 CNN2Q99439 309 aaKnown RBP4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ATF6BQ99941 703 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TTYH2Q9BSA4 534 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 HDHD5Q9BXW7 423 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 RTN4RQ9BZR6 473 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 SRRQ9GZT4 340 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 TPK1Q9H3S4 243 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 PPP1R3EQ9H7J1 279 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MARCH7Q9H992 704 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 FKRPQ9H9S5 495 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ABCB9Q9NP78 766 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NANSQ9NR45 359 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ABCB10Q9NRK6 738 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NCDNQ9UBB6 729 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 ST6GALNAC2Q9UJ37 374 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 FBXL4Q9UKA2 621 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 FBXO4Q9UKT5 387 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 RARRES3Q9UL19 164 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MKL2Q9ULH7 1088 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 NPFFR2Q9Y5X5 522 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 EML5Q05BV3 1969 aa4.89□□□□□ -1.63
SF3B3-213ENST00000569687 MYO15AQ9UKN7 3530 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMED7-TICAM2A0A0A6YYA0 188 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SHISA3A0PJX4 238 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CPED1A4D0V7 1026 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 TMEM200CA6NKL6 621 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 A8MVM7 634 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 IDSB3KWA1 339 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 LRRN3E7EW58 273 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 E9PI62 339 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 J3QLW9 94 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 CASKO14936 926 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 HCRTR2O43614 444 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 OR2T1O43869 369 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-213ENST00000569687 SLC19A2O60779 497 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 FZD7O75084 574 aa4.88□□□□□ -1.63
SF3B3-213ENST00000569687 ZFAND5O76080 213 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms