RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LGI1O95970 557 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 HPRP00739 348 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 BGLAPP02818 100 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 OPN1SWP03999 348 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 THY1P04216 161 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 PTAFRP25105 342 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 GRPRP30550 384 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 CDKN1AP38936 164 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 RGS8P57771 180 aaPredicted RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 LTBQ06643 244 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 OR1Q1Q15612 314 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 DUSP7Q16829 419 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 TRMT5Q32P41 509 aaKnown RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 ELOA3BQ3SY89 546 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 TBRG1Q3YBR2 411 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 HIKESHIQ53FT3 197 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 SWT1Q5T5J6 900 aaKnown RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 C1QTNF12Q5T7M4 302 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ULK3Q6PHR2 472 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 C5orf46Q6UWT4 87 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 TMEM108Q6UXF1 575 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 CLEC9AQ6UXN8 241 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 LINC00114Q6XXX2 140 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 WDR88Q6ZMY6 472 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 CALHM3Q86XJ0 350 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ARMC8Q8IUR7 673 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 TMEM123Q8N131 208 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 KDM8Q8N371 416 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 SMYD1Q8NB12 490 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 C11orf65Q8NCR3 313 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ELOA3Q8NG57 546 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 OR1K1Q8NGR3 316 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 OR6S1Q8NH40 331 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 DNAJA4Q8WW22 397 aaPredicted RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 TAMM41Q96BW9 452 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 RADILQ96JH8 1075 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 MOGAT1Q96PD6 335 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ZNF607Q96SK3 696 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 ZNF426Q9BUY5 554 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 PCDHAC1Q9H158 963 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 FGFR1OP2Q9NVK5 253 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 CISD1Q9NZ45 108 aaKnown RBP6.84□□□□□ -1.31
CDH3-209ENST00000569080 UPB1Q9UBR1 384 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 B3GALT5Q9Y2C3 310 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 AMDHD2Q9Y303 409 aa6.84□□□□□ -1.31
CDH3-209ENST00000569080 SVEP1Q4LDE5 3571 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 A0A096LNT2 108 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ARPC4-TTLL3A0A0A6YYG9 625 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 IGHV1-18A0A0C4DH31 117 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ZNF503-AS2A6NEH8 195 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ZNF587BE7ETH6 402 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 LRRN3E7EW58 273 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ATP6V1G2-DDX39BF2Z307 99 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 RPL36A-HNRNPH2H7BZ11 118 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 M0R1B8 84 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 AIM2O14862 343 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 OR2T1O43869 369 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 SERPINB7O75635 380 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 LY6G6DO95868 133 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 C8BP07358 591 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 HLA-DOBP13765 273 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 PTNP21246 168 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 TTKP33981 857 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 CDH12P55289 794 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 CLDN17P56750 224 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 NCALDP61601 193 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 TGFBR3Q03167 851 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 TNK1Q13470 666 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 NFYCQ13952 458 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ETFDHQ16134 617 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 CYP51A1Q16850 503 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 RABL3Q5HYI8 236 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 COQ5Q5HYK3 327 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 TMEM225Q6GV28 225 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 NIPAL3Q6P499 406 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ZNF613Q6PF04 617 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 KLHL17Q6TDP4 642 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 Q71RC1 249 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 RBM45Q8IUH3 476 aaKnown RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 SCAIQ8N9R8 606 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 BHLHE22Q8NFJ8 381 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 OR6T1Q8NGN1 323 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 MAGEE2Q8TD90 523 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 BCL2L2Q92843 193 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 SLC25A36Q96CQ1 311 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ZNF837Q96EG3 531 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 SLC47A1Q96FL8 570 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 ZNF317Q96PQ6 595 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 OR2M2Q96R28 347 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 TMEM43Q9BTV4 400 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 BDH2Q9BUT1 245 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 C1QTNF6Q9BXI9 259 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 CCDC134Q9H6E4 229 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 EVA1AQ9H8M9 152 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 SEC61A2Q9H9S3 476 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 OBP2BQ9NPH6 170 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 SAR1AQ9NR31 198 aa6.83□□□□□ -1.32
CDH3-209ENST00000569080 CRNNQ9UBG3 495 aaPredicted RBP6.83□□□□□ -1.32
CDH3-209ENST00000569080 GDF2Q9UK05 429 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms