RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TAMM41Q96BW9 452 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SLC41A3Q96GZ6 507 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 ZNF317Q96PQ6 595 aaPredicted RBP17.81■□□□□ 0.44
CLK3-225ENST00000569063 EPYCQ99645 322 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 MCHR1Q99705 422 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 ECSITQ9BQ95 431 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 TMEM43Q9BTV4 400 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 LINC00470Q9BZP3 86 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SLC17A5Q9NRA2 495 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 B3GAT1Q9P2W7 334 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 SEC14L4Q9UDX3 406 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 LAMP3Q9UQV4 416 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 AMDHD2Q9Y303 409 aa17.81■□□□□ 0.44
CLK3-225ENST00000569063 LOC100653049A0A140TA62 436 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 A0A1W2PR80 420 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 M0R082 166 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 ABCD4O14678 606 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 KRT33AO76009 404 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 KRT34O76011 436 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 CD247P20963 164 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 GRPRP30550 384 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 ZNF83P51522 516 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 CRYBA2P53672 197 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 RPS4XP62701 263 aaKnown RBP17.8■□□□□ 0.44
CLK3-225ENST00000569063 NPTX1Q15818 432 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 NIPAL3Q6P499 406 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 LINC00114Q6XXX2 140 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 YTHDF3Q7Z739 585 aaKnown RBP17.8■□□□□ 0.44
CLK3-225ENST00000569063 PCYOX1LQ8NBM8 494 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 ADPRHL1Q8NDY3 354 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 ZNF417Q8TAU3 575 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 RNF217Q8TC41 542 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 SLC26A7Q8TE54 656 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 C10orf82Q8WW14 230 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 RASSF5Q8WWW0 418 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 ZNF587Q96SQ5 575 aaPredicted RBP17.8■□□□□ 0.44
CLK3-225ENST00000569063 MGAT4BQ9UQ53 548 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 RCE1Q9Y256 329 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 CORINQ9Y5Q5 1042 aa17.8■□□□□ 0.44
CLK3-225ENST00000569063 OVOL3O00110 214 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 ATP8B1O43520 1251 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 ZNF432O94892 652 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 BGLAPP02818 100 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 SOD3P08294 240 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 CD40P25942 277 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 LTBQ06643 244 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 LGALS3BPQ08380 585 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 VEZF1Q14119 521 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 PGGHGQ32M88 737 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 ENTPD8Q5MY95 495 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 SCAIQ8N9R8 606 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 OR4D11Q8NGI4 311 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 C18orf12Q96KH6 178 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 PCDHAC1Q9H158 963 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 GID8Q9NWU2 228 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 CISD1Q9NZ45 108 aaKnown RBP17.79■□□□□ 0.44
CLK3-225ENST00000569063 MAGED1Q9Y5V3 778 aaPredicted RBP17.79■□□□□ 0.44
CLK3-225ENST00000569063 CAPN7Q9Y6W3 813 aa17.79■□□□□ 0.44
CLK3-225ENST00000569063 ZNF587BE7ETH6 402 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 MS4A18H0YCH9 400 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 CHP2O43745 196 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 UPK3AO75631 287 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 CBLP22681 906 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 CLDN17P56750 224 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 PRPS1P60891 318 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 SLC25A3Q00325 362 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 C1DQ13901 141 aaKnown RBP17.78■□□□□ 0.44
CLK3-225ENST00000569063 MS4A18Q3C1V0 323 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 ERICH5Q6P6B1 374 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 LINGO2Q7L985 606 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 RBM45Q8IUH3 476 aaKnown RBP17.78■□□□□ 0.44
CLK3-225ENST00000569063 ANKK1Q8NFD2 765 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 ZNF583Q96ND8 569 aa17.78■□□□□ 0.44
CLK3-225ENST00000569063 M0R1B8 84 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 LYPD3O95274 346 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 CDH2P19022 906 aaPredicted RBP17.77■□□□□ 0.44
CLK3-225ENST00000569063 CDH11P55287 796 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
CLK3-225ENST00000569063 OR1K1Q8NGR3 316 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 VANGL1Q8TAA9 524 aaPredicted RBP17.77■□□□□ 0.44
CLK3-225ENST00000569063 ADAMTS16Q8TE57 1224 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 Q96MF0 132 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 MOGAT1Q96PD6 335 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 ALKBH3Q96Q83 286 aaPredicted RBP17.77■□□□□ 0.44
CLK3-225ENST00000569063 C1QTNF6Q9BXI9 259 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 ASPNQ9BXN1 380 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 GRIP2Q9C0E4 1043 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 OBP2BQ9NPH6 170 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 FAIMQ9NVQ4 179 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 MRPL39Q9NYK5 338 aaKnown RBP17.77■□□□□ 0.44
CLK3-225ENST00000569063 ARMCX1Q9P291 453 aa17.77■□□□□ 0.44
CLK3-225ENST00000569063 ROS1P08922 2347 aa17.77■□□□□ 0.43
CLK3-225ENST00000569063 TRAPPC13A5PLN9 417 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 CPSF4LA6NMK7 179 aaKnown RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 RPL36A-HNRNPH2H7BZ11 118 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 TRAF3IP2O43734 574 aaPredicted RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 SLC43A1O75387 559 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 WNT11O96014 354 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 MT-ATP6P00846 226 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 THY1P04216 161 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms