RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 KRT75O95678 551 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 RPS5P46782 204 aaKnown RBP13.45□□□□□ -0.26
NME3-211ENST00000568561 DSTNP60981 165 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 TXNL4AP83876 142 aaKnown RBP13.45□□□□□ -0.26
NME3-211ENST00000568561 NPRL3Q12980 569 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 RNF220Q5VTB9 566 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 SPATA21Q7Z572 469 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 SLC38A5Q8WUX1 472 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 ZNF837Q96EG3 531 aaPredicted RBP13.45□□□□□ -0.26
NME3-211ENST00000568561 KTI12Q96EK9 354 aaPredicted RBP13.45□□□□□ -0.26
NME3-211ENST00000568561 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 PTDSS2Q9BVG9 487 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 KCNK9Q9NPC2 374 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 RASD1Q9Y272 281 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 TM9SF1O15321 606 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 IGKV3-15P01624 115 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 DAOP14920 347 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
NME3-211ENST00000568561 CRISP3P54108 245 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 EGR4Q05215 589 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 TRIP10Q15642 601 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 OR4F15Q8NGB8 312 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 LINC00470Q9BZP3 86 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 RAB1BQ9H0U4 201 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 SSU72Q9NP77 194 aaKnown RBP13.44□□□□□ -0.26
NME3-211ENST00000568561 DYNLRB1Q9NP97 96 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 B3GAT1Q9P2W7 334 aa13.44□□□□□ -0.26
NME3-211ENST00000568561 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 OR6C65A6NJZ3 312 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 LILRA1O75019 489 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 ZNF432O94892 652 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 ANP32DO95626 131 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 IGFBP1P08833 259 aaPredicted RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 NUDT7P0C024 238 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 KITP10721 976 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 NPR2P20594 1047 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 GTF2E2P29084 291 aaKnown RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 CAPZA2P47755 286 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 SNTB2Q13425 540 aaKnown RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 CCNIQ14094 377 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 LARS2Q15031 903 aaKnown RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 ZSWIM7Q19AV6 140 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 CEACAM16Q2WEN9 425 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 NXNQ6DKJ4 435 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 KRT80Q6KB66 452 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 MDP1Q86V88 176 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 ANKRD42Q8N9B4 389 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 NUP37Q8NFH4 326 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 MAGEE2Q8TD90 523 aaPredicted RBP13.43□□□□□ -0.26
NME3-211ENST00000568561 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 SPATA9Q9BWV2 254 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 TPK1Q9H3S4 243 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 TPT1P8Q9HAU6 139 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 GPR35Q9HC97 309 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 CALML5Q9NZT1 146 aa13.43□□□□□ -0.26
NME3-211ENST00000568561 A0A096LPI6 279 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 TMEM129A0AVI4 362 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 M0R082 166 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 SLC43A1O75387 559 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 CBR1P16152 277 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF43P17038 809 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ITGA2P17301 1181 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 CBLP22681 906 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 GIFP27352 417 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 SH3BGRP55822 239 aaPredicted RBP13.42□□□□□ -0.26
NME3-211ENST00000568561 IL1RL1Q01638 556 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 LRRC74AQ0VAA2 488 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 SQLEQ14534 574 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ADRM1Q16186 407 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 C3orf36Q3SXR2 165 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF311Q5JNZ3 666 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 PHYHD1Q5SRE7 291 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 RINLQ6ZS11 566 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 KIRREL3Q8IZU9 778 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 OR9I1Q8NGQ6 314 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF417Q8TAU3 575 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 CKAP2Q8WWK9 683 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 MAL2Q969L2 176 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF317Q96PQ6 595 aaPredicted RBP13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF587Q96SQ5 575 aaPredicted RBP13.42□□□□□ -0.26
NME3-211ENST00000568561 DOK1Q99704 481 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 NOX3Q9HBY0 568 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 CRLF2Q9HC73 371 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 RCE1Q9Y256 329 aa13.42□□□□□ -0.26
NME3-211ENST00000568561 HDAC3O15379 428 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 SLC22A3O75751 556 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 IL6P05231 212 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 ADRA2AP08913 450 aa13.41□□□□□ -0.26
NME3-211ENST00000568561 TACSTD2P09758 323 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms