RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SMR3AQ99954 134 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 AMBRA1Q9C0C7 1298 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 MMADHCQ9H3L0 296 aaPredicted RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 CISD1Q9NZ45 108 aaKnown RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 TESQ9UGI8 421 aaKnown RBP12.69□□□□□ -0.38
CMTM3-215ENST00000568477 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 ANGPT4Q9Y264 503 aa12.69□□□□□ -0.38
CMTM3-215ENST00000568477 A0A1W2PR80 420 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 TRIM64A6NGJ6 449 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 TRIM64BA6NI03 449 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 SHISA9B4DS77 424 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 FTCDNL1E5RQL4 147 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 TPST1O60507 370 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 KRT33AO76009 404 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 PNMTP11086 282 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 HTR2AP28223 471 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 MPGP29372 298 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 AQP1P29972 269 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 RPS5P46782 204 aaKnown RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 P2RY4P51582 365 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 RGS8P57771 180 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 EGR4Q05215 589 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 ADRM1Q16186 407 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 CYP51A1Q16850 503 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 CLEC9AQ6UXN8 241 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 COMTD1Q86VU5 262 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 ARMC8Q8IUR7 673 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 PIAS4Q8N2W9 510 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 C11orf65Q8NCR3 313 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 TSPEARQ8WU66 669 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 SLC38A4Q969I6 547 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 UTP4Q969X6 686 aaKnown RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 TRMT61AQ96FX7 289 aaKnown RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 CGREF1Q99674 301 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 RSPO3Q9BXY4 272 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 CADM1Q9BY67 442 aaKnown RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 ALG2Q9H553 416 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 SLC17A5Q9NRA2 495 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 SELENONQ9NZV5 590 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
CMTM3-215ENST00000568477 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-215ENST00000568477 OR6C65A6NJZ3 312 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 M0R1B8 84 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 OVOL3O00110 214 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 OR2T1O43869 369 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 MGRN1O60291 552 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 CD40P25942 277 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 MTPNP58546 118 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 RBBP4Q09028 425 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 RIPK1Q13546 671 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 NFYCQ13952 458 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 MAPRE2Q15555 327 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 ALG10BQ5I7T1 473 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 C1QTNF12Q5T7M4 302 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 FAM69AQ5T7M9 428 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 SLC22A25Q6T423 547 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 CREB3L2Q70SY1 520 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 RETREG3Q86VR2 466 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-215ENST00000568477 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 RBM15BQ8NDT2 890 aaKnown RBP12.67□□□□□ -0.38
CMTM3-215ENST00000568477 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 KTI12Q96EK9 354 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-215ENST00000568477 SLC47A1Q96FL8 570 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 ANKRD27Q96NW4 1050 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 EVA1AQ9H8M9 152 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 POU2F3Q9UKI9 436 aa12.67□□□□□ -0.38
CMTM3-215ENST00000568477 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 TRAV36DV7A0A075B6V5 113 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 ZNF587BE7ETH6 402 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 AIM2O14862 343 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 FZD7O75084 574 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 HEXAP06865 529 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 CDH2P19022 906 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 CDKN1AP38936 164 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 SELENOPP49908 381 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 PCBP3P57721 371 aaKnown RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 PRPS1P60891 318 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 MXRA7P84157 204 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 LTBQ06643 244 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 CYLC2Q14093 348 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 ETFDHQ16134 617 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 NIPAL3Q6P499 406 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 DTX2Q86UW9 622 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 RANBP3LQ86VV4 465 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-215ENST00000568477 PTOV1Q86YD1 416 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 EPHX4Q8IUS5 362 aa12.66□□□□□ -0.38
CMTM3-215ENST00000568477 DEPDC4Q8N2C3 294 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms