RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PLPPR2Q96GM1 343 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 ZC3HAV1LQ96H79 300 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 MPP4Q96JB8 637 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 MCHR1Q99705 422 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 PRSS27Q9BQR3 290 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 TMUB1Q9BVT8 246 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 SLC19A3Q9BZV2 496 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 EFCAB1Q9HAE3 211 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 NGBQ9NPG2 151 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 MRPL39Q9NYK5 338 aaKnown RBP7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 ARMCX1Q9P291 453 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 RPS6KB2Q9UBS0 482 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 RCE1Q9Y256 329 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 PLEKHA6Q9Y2H5 1048 aa7.2□□□□□ -1.26
HDGFL3-205ENST00000568129 ELOVL7A1L3X0 281 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 TRAPPC13A5PLN9 417 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 HTR3EA5X5Y0 456 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 M0R3H8 397 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 OVOL3O00110 214 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 TRAF3IP2O43734 574 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 PLAUP00749 431 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 IFNA14P01570 189 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 OPN1SWP03999 348 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 DANCRP0C864 163 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 THRBP10828 461 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 HOXB1P14653 301 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 GRPRP30550 384 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ART1P52961 327 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 FAPQ12884 760 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 FXNQ16595 210 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 C3orf36Q3SXR2 165 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 PRSS57Q6UWY2 283 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF704Q6ZNC4 412 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 LINGO2Q7L985 606 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 AAED1Q7RTV5 226 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 PXKQ7Z7A4 578 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 TGIF2LYQ8IUE0 185 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 MICU2Q8IYU8 434 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 POU5F2Q8N7G0 328 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ANKS4BQ8N8V4 417 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 OR2T12Q8NG77 320 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ADAMTS16Q8TE57 1224 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 RADILQ96JH8 1075 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 LRR1Q96L50 414 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 MOGAT1Q96PD6 335 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 EPYCQ99645 322 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ELAC2Q9BQ52 826 aaKnown RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 SLCO5A1Q9H2Y9 848 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 DLL4Q9NR61 685 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF701Q9NV72 531 aaPredicted RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ADPRHL2Q9NX46 363 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 NPAP1Q9NZP6 1156 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 SLC13A4Q9UKG4 626 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 BAG5Q9UL15 447 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 USP22Q9UPT9 525 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 TEP1Q99973 2627 aaKnown RBP7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 ACANP16112 2415 aa7.19□□□□□ -1.26
HDGFL3-205ENST00000568129 CCT8L1PA6NM43 557 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 SHISA9B4DS77 424 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 M0R082 166 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 NME4O00746 187 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 PLPP3O14495 311 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 NDUFAB1O14561 156 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 DYNC1I1O14576 645 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 HS3ST1O14792 307 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 OR5F1O95221 314 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 HPRP00739 348 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ASAH2BP0C7U1 165 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF43P17038 809 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 RBM34P42696 430 aaKnown RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 SELENOPP49908 381 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 NCALDP61601 193 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ADAM8P78325 824 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 TGFBR3Q03167 851 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 KEAP1Q14145 624 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 PPA1Q15181 289 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 STK11Q15831 433 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF74Q16587 644 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 SHEQ5VZ18 495 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 CASP12Q6UXS9 341 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF627Q7L945 461 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ABHD12BQ7Z5M8 362 aaPredicted RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 WFDC8Q8IUA0 241 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 C20orf196Q8IYI0 205 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 TMEM123Q8N131 208 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 BCL2L2Q92843 193 aaPredicted RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 SLC25A36Q96CQ1 311 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 MUCL1Q96DR8 90 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 CMTM5Q96DZ9 223 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 NELFAQ9H3P2 528 aa7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 ESRP2Q9H6T0 727 aaKnown RBP7.18□□□□□ -1.26
HDGFL3-205ENST00000568129 FKRPQ9H9S5 495 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms