RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 WDR13Q9H1Z4 485 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 UBQLN3Q9H347 655 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 IGFLR1Q9H665 355 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 CCDC86Q9H6F5 360 aaKnown RBP5□□□□□ -1.61
LINC01541-202ENST00000568095 MYOZ1Q9NP98 299 aaPredicted RBP5□□□□□ -1.61
LINC01541-202ENST00000568095 ACKR4Q9NPB9 350 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 ZFP57Q9NU63 452 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 SPHK1Q9NYA1 384 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 MBD2Q9UBB5 411 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 ZNF223Q9UK11 482 aaPredicted RBP5□□□□□ -1.61
LINC01541-202ENST00000568095 MKL2Q9ULH7 1088 aa5□□□□□ -1.61
LINC01541-202ENST00000568095 A0A1B0GTI1 187 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 COLCA2A8K830 154 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 EFCAB7A8K855 629 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SAP18O00422 153 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PLPP1O14494 284 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SCAMP1O15126 338 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LILRA1O75019 489 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 KHDRBS3O75525 346 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 NTN1O95631 604 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CH25HO95992 272 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 RAB40ALP0C0E4 278 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PVALBP20472 110 aaPredicted RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TRHRP34981 398 aaPredicted RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 MANFP55145 182 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SSTP61278 116 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TBPL1P62380 186 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 ILF3Q12906 894 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 NUP210LQ5VU65 1888 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 MTFR2Q6P444 385 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CORO6Q6QEF8 472 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LRRN1Q6UXK5 716 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 GDPD4Q6W3E5 623 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TMEM64Q6YI46 380 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LRRC69Q6ZNQ3 347 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 USP53Q70EK8 1073 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 OR2W3Q7Z3T1 314 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TMPRSS9Q7Z410 1059 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TMPRSS11BQ86T26 416 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 FAM129CQ86XR2 697 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LNX2Q8N448 690 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 OR6N1Q8NGY5 312 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 OR5J2Q8NH18 312 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 NANPQ8TBE9 248 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 C15orf40Q8WUR7 153 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 RAB40AQ8WXH6 277 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SMIM19Q96E16 107 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 C4orf36Q96KX1 117 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 GABRG3Q99928 467 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CMSS1Q9BQ75 279 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 KXD1Q9BQD3 176 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 HCAR1Q9BXC0 346 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SLC38A1Q9H2H9 487 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LHX9Q9NQ69 397 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 MIEF1Q9NQG6 463 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 MRPL15Q9P015 296 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 KLK11Q9UBX7 282 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TNFSF18Q9UNG2 199 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 GPR55Q9Y2T6 319 aaPredicted RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 FXYD6-FXYD2A0A087WZ82 144 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CDHR4A6H8M9 788 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SLC22A31A6NKX4 558 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 IFITM5A6NNB3 132 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 ACOT7O00154 380 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CDC42EP2O14613 210 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 IMPA2O14732 288 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 BCL2L11O43521 198 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SSX5O60225 188 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CTNSO60931 367 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LEFTY1O75610 366 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 ARL6IP5O75915 188 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 OR2F2O95006 317 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SPDEFO95238 335 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 C1orf105O95561 183 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CATP04040 527 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SBK2P0C263 348 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CALCBP10092 127 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CFPP27918 469 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SERPINA4P29622 427 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 DCTDP32321 178 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PREPP48147 710 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SLC3A1Q07837 685 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 STX4Q12846 297 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 OR2F1Q13607 317 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 SNTB1Q13884 538 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 ZNF234Q14588 700 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 CDK5R1Q15078 307 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 RBMS2Q15434 407 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PAN3Q58A45 887 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 FAM74A1Q5RGS3 127 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PIP5KL1Q5T9C9 394 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 STPG1Q5TH74 334 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PEAR1Q5VY43 1037 aaPredicted RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PWWP2BQ6NUJ5 590 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PLBD1Q6P4A8 553 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 TSSK4Q6SA08 328 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 MTSS1LQ765P7 747 aa4.99□□□□□ -1.61
LINC01541-202ENST00000568095 PARS2Q7L3T8 475 aaKnown RBP4.99□□□□□ -1.61
LINC01541-202ENST00000568095 LINGO2Q7L985 606 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms