RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 NIPAL3Q6P499 406 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 ANKRD16Q6P6B7 361 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 SPATA21Q7Z572 469 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 SLC38A5Q8WUX1 472 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 BCL2L2Q92843 193 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 KATNB1Q9BVA0 655 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 CA10Q9NS85 328 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 THUMPD1Q9NXG2 353 aaKnown RBP16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 ZIM2Q9NZV7 527 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 KCNS2Q9ULS6 477 aa16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 ZNF443Q9Y2A4 671 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-207ENST00000567806 A0A0G2JPF8 293 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 VSTM5A8MXK1 200 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 HNRNPCL2B2RXH8 293 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 HNRNPCL3B7ZW38 293 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 B9A039 149 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 HNRNPCL1O60812 293 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SHOX2O60902 331 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 HNRNPCL4P0DMR1 293 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 HOXB1P14653 301 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 NR4A2P43354 598 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 P2RY4P51582 365 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 LGALS3BPQ08380 585 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 IQCCQ4KMZ1 466 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 RNF220Q5VTB9 566 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 FAM166AQ6J272 317 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 MAVSQ7Z434 540 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 MIER2Q8N344 545 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 STK35Q8TDR2 534 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SLC25A36Q96CQ1 311 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 FOXN4Q96NZ1 517 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SORCS2Q96PQ0 1159 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SPATA9Q9BWV2 254 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 RMND5AQ9H871 391 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 TPT1P8Q9HAU6 139 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 MOV10Q9HCE1 1003 aaKnown RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 MYOZ1Q9NP98 299 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SDR39U1Q9NRG7 319 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 SLC6A13Q9NSD5 602 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 IFT52Q9Y366 437 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 DSPPQ9NZW4 1301 aa16.39■□□□□ 0.21
GTF3C1-207ENST00000567806 CUBNO60494 3623 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 A0A096LPE4 126 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 A0A1W2PPZ6 126 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 LOC390937A0A1W2PQ73 354 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 VWC2LB2RUY7 222 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 NR5A2O00482 541 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 SLC22A2O15244 555 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 FRS3O43559 492 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 AHSA1O95433 338 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 FAM107AO95990 144 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 OR4A8P0C604 315 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 PRG2P13727 222 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 APEHP13798 732 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 GTF2E2P29084 291 aaKnown RBP16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 MVDP53602 400 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 SQLEQ14534 574 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 VHLLQ6RSH7 139 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 EPHX4Q8IUS5 362 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ARIH2OSQ8N7S6 290 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ANKS4BQ8N8V4 417 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ZNF540Q8NDQ6 660 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 MFSD8Q8NHS3 518 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 MAGEE2Q8TD90 523 aaPredicted RBP16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 C3orf49Q96BT1 292 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ITCHQ96J02 903 aa16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ALKBH3Q96Q83 286 aaPredicted RBP16.38■□□□□ 0.21
GTF3C1-207ENST00000567806 ARPC4-TTLL3A0A0A6YYG9 625 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 UPK3AO75631 287 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 ZNF43P17038 809 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 SRD5A1P18405 259 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 THBS2P35442 1172 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 SEC24CP53992 1094 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 GYS2P54840 703 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 SH3BGRP55822 239 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 TUBA1BP68363 451 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 TUBA4AP68366 448 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 NAAAQ02083 359 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 C3orf36Q3SXR2 165 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 ZNF311Q5JNZ3 666 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 RPS26P11Q5JNZ5 115 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 TUBA1AQ71U36 451 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 SERPINA11Q86U17 422 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 KDM8Q8N371 416 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 OR4F15Q8NGB8 312 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 TMEM19Q96HH6 336 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 OR52B2Q96RD2 323 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 EBF4Q9BQW3 602 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 LINC00470Q9BZP3 86 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 RAB1BQ9H0U4 201 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 CHODLQ9H9P2 273 aa16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 CRNNQ9UBG3 495 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-207ENST00000567806 RPS6KB2Q9UBS0 482 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms