RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TESMINQ9Y4I5 508 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 FLVCR1Q9Y5Y0 555 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 SPTAN1Q13813 2472 aaKnown RBP10.83□□□□□ -0.68
SF3B3-208ENST00000567250 BAHCC1Q9P281 2608 aa10.83□□□□□ -0.68
SF3B3-208ENST00000567250 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 USP9YO00507 2555 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 SPTBN1Q01082 2364 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 A1L4Q6 167 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF814B7Z6K7 855 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 MRPL33O75394 65 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 KRT36O76013 467 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 OR7A10O76100 309 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 SAGP10523 405 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 IFI30P13284 250 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 KLK2P20151 261 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 CBLP22681 906 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 RRM2P31350 389 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 IFNGR2P38484 337 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 PUDPQ08623 228 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 C1DQ13901 141 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 ANKDD1AQ495B1 522 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 CASP12Q6UXS9 341 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 BTLAQ7Z6A9 289 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 KIF18BQ86Y91 864 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 UEVLDQ8IX04 471 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 ZNF100Q8IYN0 542 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 ADGRG5Q8IZF4 528 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 LINC00471Q8N535 108 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 PFN4Q8NHR9 129 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 LIPHQ8WWY8 451 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 RNASE6Q93091 150 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 TMEM45BQ96B21 275 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 APH1AQ96BI3 265 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 BPIFA2Q96DR5 249 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 DHRS1Q96LJ7 313 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 OXGR1Q96P68 337 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 MOGAT1Q96PD6 335 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 UCK2Q9BZX2 261 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 C12orf49Q9H741 205 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 MEPEQ9NQ76 525 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-208ENST00000567250 PLSCR4Q9NRQ2 329 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 TMCC3Q9ULS5 477 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 RCE1Q9Y256 329 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 NOX1Q9Y5S8 564 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 DOPEY2Q9Y3R5 2298 aa10.82□□□□□ -0.68
SF3B3-208ENST00000567250 PTPN13Q12923 2485 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 A0A087WUU8 490 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 LOC102725191A0A1B0GVB3 256 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 TCRBV3S1A0A5B6 114 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 OR6C65A6NJZ3 312 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 PIP5K1CO60331 668 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 RAMP1O60894 148 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 DIRAS1O95057 198 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 CNOT4O95628 575 aaKnown RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 CGAP01215 116 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 ASAH2BP0C7U1 165 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 ADORA3P0DMS8 318 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 AHCYP23526 432 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 UQCRC1P31930 480 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 OR3A2P47893 321 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 SLC9A3P48764 834 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 PCYT1AP49585 367 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 P2RY4P51582 365 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 SORDQ00796 357 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 POU3F1Q03052 451 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 PRKCDQ05655 676 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 FOXD4Q12950 439 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 CDSNQ15517 529 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 IQCCQ4KMZ1 466 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 TFAP2EQ6VUC0 442 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 SLC46A3Q7Z3Q1 461 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 HDDC2Q7Z4H3 204 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 TSEN54Q7Z6J9 526 aaKnown RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 ANKK1Q8NFD2 765 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 SLC7A13Q8TCU3 470 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 CANT1Q8WVQ1 401 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 PSMG3-AS1Q96PY0 264 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 OPN3Q9H1Y3 402 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 REEP1Q9H902 201 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 C20orf141Q9NUB4 165 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 ELOVL5Q9NYP7 299 aa10.81□□□□□ -0.68
SF3B3-208ENST00000567250 PLEKHB1Q9UF11 243 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 ING1Q9UK53 422 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-208ENST00000567250 A8MXE2 369 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 CLDN1O95832 211 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 CST1P01037 141 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 POU2F1P14859 743 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 FUT1P19526 365 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 LTBQ06643 244 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 TFF3Q07654 80 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 PODNL1Q6PEZ8 512 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 CREB3L2Q70SY1 520 aa10.8□□□□□ -0.68
SF3B3-208ENST00000567250 ABHD12BQ7Z5M8 362 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-208ENST00000567250 PXKQ7Z7A4 578 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms