RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 EPHX4Q8IUS5 362 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 BBS10Q8TAM1 723 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 BCL2L2Q92843 193 aaPredicted RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 SLC35B4Q969S0 331 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 VPS33AQ96AX1 596 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 ZNF317Q96PQ6 595 aaPredicted RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 ALKBH3Q96Q83 286 aaPredicted RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 VRK1Q99986 396 aaPredicted RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 PIMREGQ9BSJ6 248 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 KATNB1Q9BVA0 655 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 BCL2L10Q9HD36 194 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 LPAR3Q9UBY5 353 aa10.41□□□□□ -0.74
UBR1-206ENST00000566493 FBN1P35555 2871 aaKnown RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
UBR1-206ENST00000566493 A0A096LPE4 126 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 ARPC4-TTLL3A0A0A6YYG9 625 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 A0A1W2PPZ6 126 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 TMEM229AB2RXF0 380 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 B9A039 149 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 NDUFS8O00217 210 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 CLIC1O00299 241 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 NR5A2O00482 541 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 OR2T1O43869 369 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 NPIPB7O75200 414 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 UPK3AO75631 287 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 LY6HO94772 140 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 PNMTP11086 282 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 GZMKP49863 264 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 STX1BP61266 288 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 MAGOHP61326 146 aaKnown RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 HOXC5Q00444 222 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 IL1RL1Q01638 556 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 ROR2Q01974 943 aaKnown RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 FADDQ13158 208 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 GGTLC2Q14390 218 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 RGNQ15493 299 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 CARTPTQ16568 116 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 C3orf36Q3SXR2 165 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 VHLLQ6RSH7 139 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 C5orf46Q6UWT4 87 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 KDM8Q8N371 416 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 GPR137CQ8N3F9 429 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 GOLGA6L1Q8N7Z2 621 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 OR9I1Q8NGQ6 314 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 OR52B2Q96RD2 323 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 SHARPINQ9H0F6 387 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 MYOZ1Q9NP98 299 aaPredicted RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 A4GALTQ9NPC4 353 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 CA10Q9NS85 328 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 TMEM160Q9NX00 188 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 RCE1Q9Y256 329 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 CHST2Q9Y4C5 530 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 PCDHB14Q9Y5E9 798 aa10.4□□□□□ -0.74
UBR1-206ENST00000566493 SONP18583 2426 aaKnown RBP10.4□□□□□ -0.74
UBR1-206ENST00000566493 FTCDNL1E5RQL4 147 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 AIM2O14862 343 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 AKAP8O43823 692 aaKnown RBP10.39□□□□□ -0.75
UBR1-206ENST00000566493 LMX1BO60663 402 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SLC43A1O75387 559 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 PDE5AO76074 875 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 ERCC1P07992 297 aaPredicted RBP10.39□□□□□ -0.75
UBR1-206ENST00000566493 OR4A8P0C604 315 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 IGHV4-31P0DP07 118 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 ZNF16P17020 682 aaPredicted RBP10.39□□□□□ -0.75
UBR1-206ENST00000566493 TUBA1BP68363 451 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 TUBA4AP68366 448 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 NAAAQ02083 359 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 MST1LQ2TV78 715 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 IQCCQ4KMZ1 466 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SLC2A7Q6PXP3 512 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 TUBA1AQ71U36 451 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 KRT73Q86Y46 540 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 ZNF540Q8NDQ6 660 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 OR4F15Q8NGB8 312 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 GTF2H4Q92759 462 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SLC38A4Q969I6 547 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 MAL2Q969L2 176 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SORCS2Q96PQ0 1159 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SPATA5L1Q9BVQ7 753 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 PAIP1Q9H074 479 aaKnown RBP10.39□□□□□ -0.75
UBR1-206ENST00000566493 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 SELENONQ9NZV5 590 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 CRNNQ9UBG3 495 aaPredicted RBP10.39□□□□□ -0.75
UBR1-206ENST00000566493 USH1CQ9Y6N9 552 aa10.39□□□□□ -0.75
UBR1-206ENST00000566493 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
UBR1-206ENST00000566493 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
UBR1-206ENST00000566493 PHF1O43189 567 aaPredicted RBP10.38□□□□□ -0.75
UBR1-206ENST00000566493 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
UBR1-206ENST00000566493 ERLIN1O75477 346 aa10.38□□□□□ -0.75
UBR1-206ENST00000566493 CECR9P0C854 216 aa10.38□□□□□ -0.75
UBR1-206ENST00000566493 BMP2P12643 396 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms