RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MRPS11P82912 194 aaKnown RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 HGFACQ04756 655 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 SLC25A53Q5H9E4 307 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 C3orf33Q6P1S2 294 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 ABHD12BQ7Z5M8 362 aaPredicted RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 KIR3DL3Q8N743 410 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 OR7A2PQ8NGA2 310 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CLHC1Q8NHS4 586 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 RFWD2Q8NHY2 731 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 PIGXQ8TBF5 258 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 GTF3AQ92664 365 aaKnown RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CITED1Q99966 193 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 TMEM120AQ9BXJ8 343 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 HOXD1Q9GZZ0 328 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 GLIPR2Q9H4G4 154 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 RMND5AQ9H871 391 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 SLC7A10Q9NS82 523 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 BTNL2Q9UIR0 455 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 NUP50Q9UKX7 468 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CARD8Q9Y2G2 431 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CMAHPQ9Y471 501 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF716A6NP11 495 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CFLARO15519 480 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SNX3O60493 162 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 FSHBP01225 129 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 HPXP02790 462 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CRYBA1P05813 215 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 GSNP06396 782 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 IGFBP1P08833 259 aaPredicted RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 GPC1P35052 558 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 POLR2JP52435 117 aaKnown RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SLC16A1P53985 500 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SEC24CP53992 1094 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 UFM1P61960 85 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 TXNL4AP83876 142 aaKnown RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 ZNF117Q03924 483 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 HLXQ14774 488 aaPredicted RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SLC9A3R2Q15599 337 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CD226Q15762 336 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 TOMM34Q15785 309 aaPredicted RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 TAF9Q16594 264 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 PGS1Q32NB8 556 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 HIKESHIQ53FT3 197 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 ABLIM2Q6H8Q1 611 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 ASPHD2Q6ICH7 369 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 BLOC1S3Q6QNY0 202 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CASP12Q6UXS9 341 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SPATC1Q76KD6 591 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 RHOUQ7L0Q8 258 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 PIGWQ7Z7B1 504 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CDK20Q8IZL9 346 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 KRTCAP2Q8N6L1 136 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 TRIML2Q8N7C3 387 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 FAM169BQ8N8A8 192 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 CDRT4Q8N9R6 151 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 OR4F5Q8NH21 305 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 SFXN5Q8TD22 340 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 WFDC12Q8WWY7 111 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 OR52E6Q96RD3 313 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 ELAC2Q9BQ52 826 aaKnown RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 EQTNQ9NQ60 294 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 ZNF275Q9NSD4 429 aaPredicted RBP7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 GIN1Q9NXP7 522 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 PLEK2Q9NYT0 353 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
VPS9D1-205ENST00000565452 OR6C65A6NJZ3 312 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 SLC22A31A6NKX4 558 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 M0R233 179 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 SCN2BO60939 215 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 KRT33AO76009 404 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 FAM107AO95990 144 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 NPPAP01160 153 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 KRT16P08779 473 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CECR9P0C854 216 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 ZCCHC18P0CG32 403 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 TFPIP10646 304 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 HOXB1P14653 301 aaPredicted RBP7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 TCN1P20061 433 aaPredicted RBP7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 DRD4P21917 467 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CALCRP30988 508 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 MAP3K8P41279 467 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 MTNR1AP48039 350 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CCT3P49368 545 aaKnown RBP7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 PRKAG1P54619 331 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 GYS2P54840 703 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 LOXL3P58215 753 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CBFBQ13951 182 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 MAPRE2Q15555 327 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 TIGD2Q4W5G0 525 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 KLHL26Q53HC5 615 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 ZNF385BQ569K4 471 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 SPANXN4Q5MJ08 99 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 TSPO2Q5TGU0 170 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 OLFML2AQ68BL7 652 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 OR4F3Q6IEY1 312 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CGB2Q6NT52 195 aa7.76□□□□□ -1.17
VPS9D1-205ENST00000565452 CBLN3Q6UW01 205 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms