RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 MCOLN3Q8TDD5 553 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 ZNF721Q8TF20 911 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 MAIP1Q8WWC4 291 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 EFHD2Q96C19 240 aaPredicted RBP2.38□□□□□ -2.03
PALB2-203ENST00000565038 TGM7Q96PF1 710 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 TAAR1Q96RJ0 339 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 CTRCQ99895 268 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 RTBDNQ9BSG5 229 aaPredicted RBP2.38□□□□□ -2.03
PALB2-203ENST00000565038 RSPO3Q9BXY4 272 aaPredicted RBP2.38□□□□□ -2.03
PALB2-203ENST00000565038 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 ZNF226Q9NYT6 803 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 KCNIP1Q9NZI2 227 aa2.38□□□□□ -2.03
PALB2-203ENST00000565038 MROH2BQ7Z745 1585 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 MYO10Q9HD67 2058 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 PPIAL4EA0A075B759 164 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 A0A1B0GWJ7 208 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 C12orf77C9JDV5 145 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 PRRG1O14668 218 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 XPO1O14980 1071 aaKnown RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 CD5LO43866 347 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 ATP5LO75964 103 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 OXSR1O95747 527 aaPredicted RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 RETP07949 1114 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 PPIAL4FP0DN26 164 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 CCDC130P13994 396 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 IGFBP3P17936 291 aaPredicted RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 DDOSTP39656 456 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 ASPHQ12797 758 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 PDIA2Q13087 525 aaKnown RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 VGLL4Q14135 290 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 OXA1LQ15070 435 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 FAM83EQ2M2I3 478 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 DMRTC1Q5HYR2 192 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 TTC23Q5W5X9 447 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 LCN12Q6JVE5 192 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 C1orf94Q6P1W5 598 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 ZNF546Q86UE3 836 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 THOC6Q86W42 341 aaKnown RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 CCDC50Q8IVM0 306 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 OR10G9Q8NGN4 311 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 ASB9Q96DX5 294 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 RAB34Q9BZG1 259 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 DNTTIP1Q9H147 329 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 LIN28AQ9H9Z2 209 aaKnown RBP2.37□□□□□ -2.03
PALB2-203ENST00000565038 IL26Q9NPH9 171 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 SLC35D1Q9NTN3 355 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.37□□□□□ -2.03
PALB2-203ENST00000565038 RNF14Q9UBS8 474 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 PCYOX1Q9UHG3 505 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 TIMM10BQ9Y5J6 103 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 ERCC6Q03468 1493 aa2.37□□□□□ -2.03
PALB2-203ENST00000565038 TCRBV9S1A1TA0A576 114 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 C12orf71A8MTZ7 269 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 ANGPTL7O43827 346 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 IDH1O75874 414 aaKnown RBP2.36□□□□□ -2.03
PALB2-203ENST00000565038 IGLV2-23P01705 113 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 TSPY4P0CV99 314 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 TSPY10P0CW01 314 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 HPGDP15428 266 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 HNF1AP20823 631 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 CNR1P21554 472 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 CASP4P49662 377 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 PPT1P50897 306 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 CBX1P83916 185 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 ACVR1Q04771 509 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 PLD1Q13393 1074 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 MESDQ14696 234 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 PDK4Q16654 411 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 DUSP7Q16829 419 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 NADK2Q4G0N4 442 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 TMEM255AQ5JRV8 349 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 NLRP9Q7RTR0 991 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 PCP2Q8IVA1 136 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 Q8N976 141 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 ACOT4Q8N9L9 421 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 OR52H1Q8NGJ2 320 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 OR2L8Q8NGY9 312 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 ACOT11Q8WXI4 607 aaPredicted RBP2.36□□□□□ -2.03
PALB2-203ENST00000565038 TM4SF19Q96DZ7 209 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 TSNARE1Q96NA8 513 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 OXGR1Q96P68 337 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 CAPS2Q9BXY5 557 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 LRRN3Q9H3W5 708 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 TMOD2Q9NZR1 351 aa2.36□□□□□ -2.03
PALB2-203ENST00000565038 IGLV11-55A0A075B6I3 123 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 IQANK1A0A1B0GTG1 560 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 TMEM150BA6NC51 233 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 METTL21EPA6NDL7 271 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 A8MXQ7 604 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 DIRAS1O95057 198 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 ALDOBP05062 364 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 UGT2B4P06133 528 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 RPA2P15927 270 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 CMA1P23946 247 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 QARSP47897 775 aaKnown RBP2.35□□□□□ -2.03
PALB2-203ENST00000565038 ACTA2P62736 377 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 ACTC1P68032 377 aa2.35□□□□□ -2.03
PALB2-203ENST00000565038 TNFRSF17Q02223 184 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms