RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 PLAURQ03405 335 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 SCGB2A2Q13296 93 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 SPATA21Q7Z572 469 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 VRK2Q86Y07 508 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 ZNF786Q8N393 782 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
COMMD4-211ENST00000564815 OXGR1Q96P68 337 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-211ENST00000564815 DOK1Q99704 481 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 RMND5AQ9H871 391 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
COMMD4-211ENST00000564815 AIG1Q9NVV5 245 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 RPS6KB2Q9UBS0 482 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 HAO1Q9UJM8 370 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 RCE1Q9Y256 329 aa12.34□□□□□ -0.43
COMMD4-211ENST00000564815 SH3PXD2BA1X283 911 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 TRPC5OSA6NMA1 111 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 FRS3O43559 492 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 TACSTD2P09758 323 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 IFNGR1P15260 489 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 THBS4P35443 961 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 CAPZA2P47755 286 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 CLDN17P56750 224 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 DSTNP60981 165 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 ARF1P84077 181 aaKnown RBP12.33□□□□□ -0.44
COMMD4-211ENST00000564815 ADRM1Q16186 407 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 KRT71Q3SY84 523 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 PDCD4Q53EL6 469 aaKnown RBP12.33□□□□□ -0.44
COMMD4-211ENST00000564815 COX20Q5RI15 118 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 C5orf46Q6UWT4 87 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 NET1Q7Z628 596 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-211ENST00000564815 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 SLC35B4Q969S0 331 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 SORT1Q99523 831 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 KCNK9Q9NPC2 374 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 USP22Q9UPT9 525 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-211ENST00000564815 CMAHPQ9Y471 501 aa12.33□□□□□ -0.44
COMMD4-211ENST00000564815 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 BGNP21810 368 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 CDKN2CP42773 168 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 P2RY4P51582 365 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 TUBA1BP68363 451 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 TUBA4AP68366 448 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
COMMD4-211ENST00000564815 IL1RL1Q01638 556 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 HGFACQ04756 655 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 DAG1Q14118 895 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 ZNF311Q5JNZ3 666 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 REP15Q6BDI9 236 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 TUBA1AQ71U36 451 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 SNX32Q86XE0 403 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 SVOPLQ8N434 492 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 SLC38A5Q8WUX1 472 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 ITCHQ96J02 903 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 TEX37Q96LM6 180 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 PAIP2Q9BPZ3 127 aaKnown RBP12.32□□□□□ -0.44
COMMD4-211ENST00000564815 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 MS4A5Q9H3V2 200 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 RAD21L1Q9H4I0 556 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 TPT1P8Q9HAU6 139 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 PNPOQ9NVS9 261 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 SELENONQ9NZV5 590 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 RAB21Q9UL25 225 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 NOX1Q9Y5S8 564 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 NBEAL1Q6ZS30 2694 aa12.32□□□□□ -0.44
COMMD4-211ENST00000564815 A0A0A6YYJ9 748 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 TMEM229AB2RXF0 380 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 SLCO1B7G3V0H7 640 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 AIM2O14862 343 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 LILRA1O75019 489 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 NPIPB7O75200 414 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 SLC22A3O75751 556 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 BCHEP06276 602 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 ADRA2AP08913 450 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 PNMTP11086 282 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 IDO1P14902 403 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 CALCRP30988 508 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 RPS5P46782 204 aaKnown RBP12.31□□□□□ -0.44
COMMD4-211ENST00000564815 EVX1P49640 407 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 LGALS3BPQ08380 585 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 NPRL3Q12980 569 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 MFSD13AQ14CX5 517 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 HHATQ5VTY9 493 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 KDM8Q8N371 416 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 SLC38A4Q969I6 547 aa12.31□□□□□ -0.44
COMMD4-211ENST00000564815 SNX18Q96RF0 628 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms