RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
COMMD4-209ENST00000564068 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
COMMD4-209ENST00000564068 MEIKINA0A087WXM9 373 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 A0A1B0GWA3 101 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CDK2AP1O14519 115 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 ATG12O94817 140 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 PAPLNO95428 1278 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 GP1BBP13224 206 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 PRKAR1BP31321 381 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RPS15AP62244 130 aaKnown RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 GSG1Q2KHT4 349 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 Q499Y3 187 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 COL13A1Q5TAT6 717 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 GPR139Q6DWJ6 353 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 A0A1W2PQU0 124 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 WDPCPO95876 746 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 HPXP02790 462 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 HOXB5P09067 269 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 MAOAP21397 527 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 ZNF761Q86XN6 746 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RNF113BQ8IZP6 322 aaKnown RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CLRN3Q8NCR9 226 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 SMIM4Q8WVI0 70 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RNF170Q96K19 258 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CLDND1Q9NY35 253 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 NCDNQ9UBB6 729 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 REV1Q9UBZ9 1251 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 KIF25Q9UIL4 384 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 GPR34Q9UPC5 381 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 LSM5Q9Y4Y9 91 aaKnown RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 A0A1W2PR48 441 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 E9PI62 339 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 NTN1O95631 604 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RD3LP0DJH9 198 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 FOSL2P15408 326 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 SELENOPP49908 381 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 VAMP2P63027 116 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 RASGEF1BQ0VAM2 473 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 TDGQ13569 410 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 FIGLAQ6QHK4 219 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 C12orf76Q8N812 135 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-209ENST00000564068 G6PC3Q9BUM1 346 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 ADAM18Q9Y3Q7 739 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 CACNA1IQ9P0X4 2223 aa11.65□□□□□ -0.54
COMMD4-209ENST00000564068 FITM1A5D6W6 292 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 TO15178 435 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 HTR3BO95264 441 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 MPIG6BO95866 241 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 GAAP10253 952 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 RPS27P42677 84 aaKnown RBP11.65□□□□□ -0.55
COMMD4-209ENST00000564068 POU3F4P49335 361 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 CSNK1G2P78368 415 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 CDK5Q00535 292 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 AGERQ15109 404 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 SLC18B1Q6NT16 456 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 DNM1P34Q6PK57 102 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 ADGRG3Q86Y34 549 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 OR5K2Q8NHB8 316 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 MMABQ96EY8 250 aaPredicted RBP11.65□□□□□ -0.55
COMMD4-209ENST00000564068 PEX11GQ96HA9 241 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 LYSMD1Q96S90 227 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 MEPEQ9NQ76 525 aaPredicted RBP11.65□□□□□ -0.55
COMMD4-209ENST00000564068 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.55
COMMD4-209ENST00000564068 PEX12O00623 359 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 MED6O75586 246 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 ZP3P21754 424 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 NME2P22392 152 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TUBG1P23258 451 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TAS2R20P59543 309 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PRPS1P60891 318 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PLPP7Q8NBV4 271 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 OR2AK2Q8NG84 335 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CXorf58Q96LI9 332 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 ZNF587Q96SQ5 575 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 TSPAN10Q9H1Z9 355 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 PPP1R3EQ9H7J1 279 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 ADAM29Q9UKF5 820 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 OIP5O43482 229 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 B3GALNT1O75752 331 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CSTBP04080 98 aaKnown RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 OR8U9P0C7N5 309 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 CDK3Q00526 305 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
COMMD4-209ENST00000564068 GOT1L1Q8NHS2 421 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-209ENST00000564068 RASD2Q96D21 266 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms