RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TMEM45AQ9NWC5 275 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PARPBPQ9NWS1 579 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 OXSMQ9NWU1 459 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 B3GNT2Q9NY97 397 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SLC17A7Q9P2U7 560 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 B3GAT1Q9P2W7 334 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PCDHGB4Q9UN71 923 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SLC35A3Q9Y2D2 325 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TMED5Q9Y3A6 229 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 FIS1Q9Y3D6 152 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 PPIAL4AQ9Y536 164 aa8.87□□□□□ -0.99
SF3B3-204ENST00000563739 SPIN1Q9Y657 262 aaPredicted RBP8.87□□□□□ -0.99
SF3B3-204ENST00000563739 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 RNF103-CHMP3A0A140T963 221 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 OR6C65A6NJZ3 312 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF587BE7ETH6 402 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 RPL36A-HNRNPH2H7BZ11 118 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 FAAHO00519 579 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 PLPP2O43688 288 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 EIF1BO60739 113 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 SEC14L2O76054 403 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 AK1P00568 194 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 CHRM4P08173 479 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 OR12D1P0DN82 309 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF35P13682 527 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 CPA3P15088 417 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 MATN1P21941 496 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 NR4A1P22736 598 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ZFP36P26651 326 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 HPCAL1P37235 193 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 POLR2HP52434 150 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ARF1P84077 181 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ROR2Q01974 943 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 EPS8Q12929 822 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 BNIP2Q12982 314 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 CEACAM7Q14002 265 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 OR7A5Q15622 319 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 SLC9B1Q4ZJI4 515 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 TMEM255AQ5JRV8 349 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 UGT2A3Q6UWM9 527 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 R3HCC1LQ7Z5L2 792 aaKnown RBP8.86□□□□□ -0.99
SF3B3-204ENST00000563739 C10orf107Q8IVU9 208 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 TWIST2Q8WVJ9 160 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ARL8AQ96BM9 186 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 SLC35G5Q96KT7 338 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 PTDSS2Q9BVG9 487 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 SLC38A1Q9H2H9 487 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 PIF1Q9H611 641 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 ZDHHC2Q9UIJ5 367 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 GRIP1Q9Y3R0 1128 aa8.86□□□□□ -0.99
SF3B3-204ENST00000563739 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SYNGR3O43761 229 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 IGHV2-5P01817 119 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF14P17017 642 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SOAT1P35610 550 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ETV4P43268 484 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 MAGEB1P43366 347 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 NAA20P61599 178 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 KCNJ10P78508 379 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 DAG1Q14118 895 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SPDYE7PQ495Y7 208 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 KLF17Q5JT82 389 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 C6orf136Q5SQH8 315 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 OR4F3Q6IEY1 312 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 FAHD2BQ6P2I3 314 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 NIPAL3Q6P499 406 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 TNFAIP8L2Q6P589 184 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SHQ1Q6PI26 577 aaKnown RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 NHLRC1Q6VVB1 395 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 TMEM123Q8N131 208 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 OIT3Q8WWZ8 545 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 GTF3AQ92664 365 aaKnown RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 MOAP1Q96BY2 351 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ROPN1LQ96C74 230 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 TLCD1Q96CP7 247 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 FAHD2AQ96GK7 314 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 PKNOX2Q96KN3 472 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ANKRD27Q96NW4 1050 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF317Q96PQ6 595 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 DUX5Q96PT3 197 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 TSPAN32Q96QS1 320 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 KCNS3Q9BQ31 491 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SYT3Q9BQG1 590 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 NAA11Q9BSU3 229 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 MECRQ9BV79 373 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 SUCNR1Q9BXA5 334 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 RSPO3Q9BXY4 272 aaPredicted RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 ZNF665Q9H7R5 613 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 UNKLQ9H9P5 680 aaKnown RBP8.85□□□□□ -0.99
SF3B3-204ENST00000563739 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 GPR35Q9HC97 309 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 REV1Q9UBZ9 1251 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 WDR45Q9Y484 360 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 CHST2Q9Y4C5 530 aa8.85□□□□□ -0.99
SF3B3-204ENST00000563739 M0R233 179 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 TM9SF1O15321 606 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 PEX11AO75192 247 aa8.84□□□□□ -0.99
SF3B3-204ENST00000563739 CRCPO75575 148 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms