RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 WDR89Q96FK6 387 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 GAS2L1Q99501 681 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZDHHC3Q9NYG2 299 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 FER1L6Q2WGJ9 1857 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 A0A1W2PPK0 400 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 GASTP01350 101 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 APOA2P02652 100 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SERPINA5P05154 406 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 EIF4EP06730 217 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 HOXB3P14651 431 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 ITPKBP27987 946 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PSMB3P49720 205 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 FKBP1AP62942 108 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 PHYHD1Q5SRE7 291 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NCMAPQ5T1S8 102 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 MRM1Q6IN84 353 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF534Q76KX8 674 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SYT13Q7L8C5 426 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HUS1BQ8NHY5 278 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 LKAAEAR1Q8TD35 194 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TSLPQ969D9 159 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NPY6RQ99463 290 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SMOC2Q9H3U7 446 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HHATLQ9HCP6 504 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR52A1Q9UKL2 312 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PADI1Q9ULC6 663 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ASB1Q9Y576 335 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 IRF1P10914 325 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NDUFB7P17568 137 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 GPX2P18283 190 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SRMP19623 302 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 FOXA1P55317 472 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PPIAP62937 165 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 PMS2P11Q13670 270 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR2G6Q5TZ20 316 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 KCTD11Q693B1 232 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CHST9Q7L1S5 443 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF808Q8N4W9 903 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 SHISA4Q96DD7 197 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ATG10Q9H0Y0 220 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SLC35D1Q9NTN3 355 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 KDM4FA0A1W2PPD8 638 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 PCCBP05166 539 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 SLC10A3P09131 477 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 ADPRHP54922 357 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 CLDN6P56747 220 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 SLC35A1P78382 337 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 Q6ZTK2 550 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 LYG2Q86SG7 212 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 FBXO16Q8IX29 292 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 DND1Q8IYX4 353 aaKnown RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 SLC39A11Q8N1S5 342 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR5AP2Q8NGF4 316 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 SGPP1Q9BX95 441 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 PKIBQ9C010 78 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 TMEM231Q9H6L2 316 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 GPR37O15354 613 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR2T7P0C7T2 308 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 DTYMKP23919 212 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 P2RY4P51582 365 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 POLR2HP52434 150 aaKnown RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 FAM24BQ8N5W8 94 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR2T27Q8NH04 317 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 CDS1Q92903 461 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 MRGPRX2Q96LB1 330 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 C2orf88Q9BSF0 95 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 LRFN3Q9BTN0 628 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 PLK3Q9H4B4 646 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 FBXO10Q9UK96 956 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 M0R3H8 397 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 NAAAQ02083 359 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 WSCD1Q658N2 575 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 ABHD15Q6UXT9 468 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 NKAIN3Q8N8D7 197 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR6J1Q8NGC5 347 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR6N1Q8NGY5 312 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 RHOVQ96L33 236 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 NUDT9Q9BW91 350 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 MRIQ9BWK5 157 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 FGF20Q9NP95 211 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 ZNF226Q9NYT6 803 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 UTS2RQ9UKP6 389 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 OR4E1P0C645 316 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 MPC1LP0DKB6 136 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 ZNF385CQ66K41 422 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 FAHD2BQ6P2I3 314 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 PPP1R1CQ8WVI7 109 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 RERGQ96A58 199 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 FAHD2AQ96GK7 314 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 TMEM19Q96HH6 336 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 PARD6GQ9BYG4 376 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 KLK14Q9P0G3 267 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 DNAJB11Q9UBS4 358 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 TMEFF2Q9UIK5 374 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 ZNF354AO60765 605 aaPredicted RBP5.82□□□□□ -1.48
CLK3-212ENST00000563418 GP1BAP07359 652 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 SOX2P48431 317 aa5.82□□□□□ -1.48
CLK3-212ENST00000563418 NOVA1P51513 510 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms