RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ZNF317Q96PQ6 595 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 HEATR1Q9H583 2144 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 WDR55Q9H6Y2 383 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SSU72Q9NP77 194 aaKnown RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 RPS6KB2Q9UBS0 482 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 HAO1Q9UJM8 370 aa11.28□□□□□ -0.6
SF3B3-202ENST00000562722 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-202ENST00000562722 SH3PXD2BA1X283 911 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 TRPC5OSA6NMA1 111 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SLC43A1O75387 559 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SLC22A3O75751 556 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 IL6P05231 212 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 CELA3BP08861 270 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 KITP10721 976 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 PNMTP11086 282 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 NPR2P20594 1047 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 APEX1P27695 318 aaKnown RBP11.27□□□□□ -0.61
SF3B3-202ENST00000562722 THBS4P35443 961 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
SF3B3-202ENST00000562722 CHN2P52757 468 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 HOXC5Q00444 222 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 MAPK11Q15759 364 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 HHATQ5VTY9 493 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 ANKRD42Q8N9B4 389 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 MAGEE2Q8TD90 523 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-202ENST00000562722 STK35Q8TDR2 534 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SLC38A5Q8WUX1 472 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 TMEM19Q96HH6 336 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SPATA9Q9BWV2 254 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 LINC00470Q9BZP3 86 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 RMND5AQ9H871 391 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 SLC6A13Q9NSD5 602 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 CRNNQ9UBG3 495 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-202ENST00000562722 PRDM4Q9UKN5 801 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 GPR45Q9Y5Y3 372 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 DSPPQ9NZW4 1301 aa11.27□□□□□ -0.61
SF3B3-202ENST00000562722 A0A0G2JPF8 293 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HNRNPCL2B2RXH8 293 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HNRNPCL3B7ZW38 293 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HNRNPCL1O60812 293 aaKnown RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 STAMBPO95630 424 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HNRNPCL4P0DMR1 293 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 IDO1P14902 403 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 CBR1P16152 277 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ARR3P36575 388 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 HGFACQ04756 655 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ZCCHC24Q8N2G6 241 aaKnown RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 MFSD8Q8NHS3 518 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ITCHQ96J02 903 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 SNX18Q96RF0 628 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 NELFAQ9H3P2 528 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ZNF442Q9H7R0 627 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 TPT1P8Q9HAU6 139 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 THUMPD1Q9NXG2 353 aaKnown RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 RCE1Q9Y256 329 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 PCDHB14Q9Y5E9 798 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 V9GYY5 206 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-202ENST00000562722 ANK2Q01484 3957 aa11.26□□□□□ -0.61
SF3B3-202ENST00000562722 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 HDAC3O15379 428 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 TCF21O43680 179 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 AKAP8O43823 692 aaKnown RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 NPIPB7O75200 414 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 SEC14L2O76054 403 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 IGKV3-15P01624 115 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 IFNGR1P15260 489 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 MVDP53602 400 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 SNTB2Q13425 540 aaKnown RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 DAG1Q14118 895 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 MPP2Q14168 576 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 ADRM1Q16186 407 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 CEACAM16Q2WEN9 425 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 PDCD4Q53EL6 469 aaKnown RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 KRT80Q6KB66 452 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 WDR93Q6P2C0 686 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 MDP1Q86V88 176 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 MYPOPQ86VE0 399 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-202ENST00000562722 FAM169BQ8N8A8 192 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 LINC01356Q8N9X3 169 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 PIK3C3Q8NEB9 887 aa11.25□□□□□ -0.61
SF3B3-202ENST00000562722 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms